mm9_v1_chr2_+_25036276_25036300	6.67046	POU5F1_SOX2{dimer}.p2	AY046077|Nrarp|67122|Notch-regulated ankyrin repeat protein	NM_025980|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC020293|Nrarp|67122|Notch-regulated ankyrin repeat protein	BC048088|Nrarp|67122|Notch-regulated ankyrin repeat protein
mm9_v1_chr11_-_77707282_77707373	4.77215	POU5F1_SOX2{dimer}.p2	U94700|Pipox|19193|pipecolic acid oxidase	BC013525|Pipox|19193|pipecolic acid oxidase	AK135009|Pipox|19193|pipecolic acid oxidase	AK149488|Pipox|19193|pipecolic acid oxidase	AK008555|Pipox|19193|pipecolic acid oxidase	NM_008952|Pipox|19193|pipecolic acid oxidase
mm9_v1_chr3_-_126701320_126701358	4.38094	POU5F1_SOX2{dimer}.p2	BC059251|Ank2|109676|ankyrin 2, brain	AK082352|Ank2|109676|ankyrin 2, brain
mm9_v1_chr1_-_93309713_93309830	3.9344	POU5F1_SOX2{dimer}.p2	AF247040|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK146192|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AB035178|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AF260236|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	BC012897|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK013443|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK005022|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK155340|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK012582|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK076135|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	NM_019479|Hes6|55927|hairy and enhancer of split 6 (Drosophila)	AK007480|Hes6|55927|hairy and enhancer of split 6 (Drosophila)
mm9_v1_chr4_-_33010429_33010479	3.74556	POU5F1_SOX2{dimer}.p2	BC065177|Ankrd6|140577|ankyrin repeat domain 6	NM_001012450|Ankrd6|140577|ankyrin repeat domain 6	NM_080471|Ankrd6|140577|ankyrin repeat domain 6
mm9_v1_chr2_-_26359261_26359353	3.45735	POU5F1_SOX2{dimer}.p2	AK090118|Notch1|18128|Notch gene homolog 1 (Drosophila)	NM_008714|Notch1|18128|Notch gene homolog 1 (Drosophila)
mm9_v1_chr16_-_63863905_63864000	3.38679	POU5F1_SOX2{dimer}.p2	BC138641|Epha3|13837|Eph receptor A3	BC138643|Epha3|13837|Eph receptor A3	BC145349|Epha3|13837|Eph receptor A3	AK132335|Epha3|13837|Eph receptor A3	BC060164|Epha3|13837|Eph receptor A3	M68513|Epha3|13837|Eph receptor A3	M68515|Epha3|13837|Eph receptor A3	AK084921|Epha3|13837|Eph receptor A3	AK041935|Epha3|13837|Eph receptor A3	AK045219|Epha3|13837|Eph receptor A3	NM_010140|Epha3|13837|Eph receptor A3	BC093483|Epha3|13837|Eph receptor A3	AK089119|Epha3|13837|Eph receptor A3
mm9_v1_chr5_-_67490295_67490393	3.065	POU5F1_SOX2{dimer}.p2	AK052579|Phox2b|18935|paired-like homeobox 2b	BC079610|Phox2b|18935|paired-like homeobox 2b	NM_008888|Phox2b|18935|paired-like homeobox 2b	Y14493|Phox2b|18935|paired-like homeobox 2b
mm9_v1_chr13_+_51942043_51942063	2.9398	POU5F1_SOX2{dimer}.p2	NM_011817|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	AK002237|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	AK007410|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	AB021884|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	BC001989|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma	AF055638|Gadd45g|23882|growth arrest and DNA-damage-inducible 45 gamma
mm9_v1_chrX_-_92853721_92853847	2.60996	POU5F1_SOX2{dimer}.p2	AK129302|Zc4h2|245522|zinc finger, C4H2 domain containing	AK162005|Zc4h2|245522|zinc finger, C4H2 domain containing	AK086554|Zc4h2|245522|zinc finger, C4H2 domain containing	BC050850|Zc4h2|245522|zinc finger, C4H2 domain containing	BC119285|Zc4h2|245522|zinc finger, C4H2 domain containing	BC119311|Zc4h2|245522|zinc finger, C4H2 domain containing	BC079862|Zc4h2|245522|zinc finger, C4H2 domain containing	NM_001003916|Zc4h2|245522|zinc finger, C4H2 domain containing	AK155445|Zc4h2|245522|zinc finger, C4H2 domain containing
mm9_v1_chr3_-_126701367_126701380	2.36664	POU5F1_SOX2{dimer}.p2	AK032060|Ank2|109676|ankyrin 2, brain	NM_178655|Ank2|109676|ankyrin 2, brain
mm9_v1_chr3_-_115832327_115832378	2.06277	POU5F1_SOX2{dimer}.p2	U12884|Vcam1|22329|vascular cell adhesion molecule 1	M84487|Vcam1|22329|vascular cell adhesion molecule 1	L08431|Vcam1|22329|vascular cell adhesion molecule 1	BC011159|Vcam1|22329|vascular cell adhesion molecule 1	AK016465|Vcam1|22329|vascular cell adhesion molecule 1	AK030195|Vcam1|22329|vascular cell adhesion molecule 1	AK143401|Vcam1|22329|vascular cell adhesion molecule 1	AK162954|Vcam1|22329|vascular cell adhesion molecule 1
mm9_v1_chr12_+_53800369_53800393	2.0051	POU5F1_SOX2{dimer}.p2	AK147248|Akap6|238161|A kinase (PRKA) anchor protein 6	AK147371|Akap6|238161|A kinase (PRKA) anchor protein 6	NM_198111|Akap6|238161|A kinase (PRKA) anchor protein 6
mm9_v1_chr14_-_111154292_111154370	2.00382	POU5F1_SOX2{dimer}.p2	AK029275|Slitrk6|239250|SLIT and NTRK-like family, member 6	AK044796|Slitrk6|239250|SLIT and NTRK-like family, member 6	NM_175499|Slitrk6|239250|SLIT and NTRK-like family, member 6
mm9_v1_chr8_-_48374715_48374736	1.97325	POU5F1_SOX2{dimer}.p2	AK129346|Stox2|71069|storkhead box 2
mm9_v1_chr17_-_32946797_32946863	1.88742	POU5F1_SOX2{dimer}.p2	BC052046|Zfp811|240063|zinc finger protein 811	NM_183177|Zfp811|240063|zinc finger protein 811
mm9_v1_chr5_-_5265981_5266073	1.87396	POU5F1_SOX2{dimer}.p2	AK083269|Cdk14|18647|cyclin-dependent kinase 14	AK139386|Cdk14|18647|cyclin-dependent kinase 14	BC068134|Cdk14|18647|cyclin-dependent kinase 14	AK138437|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr3_+_133902563_133902608	1.76198	POU5F1_SOX2{dimer}.p2	BC082332|Cxxc4|319478|CXXC finger 4
mm9_v1_chr3_-_146432922_146432972	1.63821	POU5F1_SOX2{dimer}.p2	AK139419|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr14_+_73637697_73637874	1.62345	POU5F1_SOX2{dimer}.p2	NM_175116|Lpar6|67168|lysophosphatidic acid receptor 6	AK032901|Lpar6|67168|lysophosphatidic acid receptor 6	AK011967|Lpar6|67168|lysophosphatidic acid receptor 6	AK169602|Lpar6|67168|lysophosphatidic acid receptor 6	BC047931|Lpar6|67168|lysophosphatidic acid receptor 6	AK008952|Lpar6|67168|lysophosphatidic acid receptor 6	BC057175|Lpar6|67168|lysophosphatidic acid receptor 6	BC069991|Lpar6|67168|lysophosphatidic acid receptor 6
mm9_v1_chr7_-_110962416_110962439	1.32553	POU5F1_SOX2{dimer}.p2	BC027434|Hbb-b2|15130|hemoglobin, beta adult minor chain	BC032264|Hbb-b2|15130|hemoglobin, beta adult minor chain	NM_016956|Hbb-b2|15130|hemoglobin, beta adult minor chain	AK168412|Hbb-b1|15129|hemoglobin, beta adult major chain	AK002394|Hbb-b1|15129|hemoglobin, beta adult major chain	AK005496|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011033|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011050|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011052|Hbb-b1|15129|hemoglobin, beta adult major chain	AK011057|Hbb-b1|15129|hemoglobin, beta adult major chain	AK012551|Hbb-b1|15129|hemoglobin, beta adult major chain	AK167615|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168477|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168584|Hbb-b1|15129|hemoglobin, beta adult major chain	AK168819|Hbb-b1|15129|hemoglobin, beta adult major chain	AK028067|Hbb-b1|15129|hemoglobin, beta adult major chain	NM_008220|Hbb-b1|15129|hemoglobin, beta adult major chain
mm9_v1_chr9_+_46036788_46036792	1.28972	POU5F1_SOX2{dimer}.p2	AK076187|Apoa1|11806|apolipoprotein A-I	AK131864|Apoa1|11806|apolipoprotein A-I	AK149576|Apoa1|11806|apolipoprotein A-I	AK161536|Apoa1|11806|apolipoprotein A-I	X64262|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr10_+_42580317_42580598	1.24928	POU5F1_SOX2{dimer}.p2	NM_172938|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AF397911|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AK034171|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	BC043310|Scml4|268297|sex comb on midleg-like 4 (Drosophila)	AK047972|Scml4|268297|sex comb on midleg-like 4 (Drosophila)
mm9_v1_chr3_-_157694667_157694727	1.22103	POU5F1_SOX2{dimer}.p2	BC069945|Srsf11|69207|serine/arginine-rich splicing factor 11	BC021809|Srsf11|69207|serine/arginine-rich splicing factor 11	AK029394|Srsf11|69207|serine/arginine-rich splicing factor 11	BC002111|Srsf11|69207|serine/arginine-rich splicing factor 11	AK146719|Srsf11|69207|serine/arginine-rich splicing factor 11	AK002411|Srsf11|69207|serine/arginine-rich splicing factor 11	NM_001093753|Srsf11|69207|serine/arginine-rich splicing factor 11
mm9_v1_chr7_+_35697397_35697452	1.2003	POU5F1_SOX2{dimer}.p2	AK145843|Pepd|18624|peptidase D	BC131945|Pepd|18624|peptidase D	BC131973|Pepd|18624|peptidase D	NM_008820|Pepd|18624|peptidase D	U51014|Pepd|18624|peptidase D	AK168384|Pepd|18624|peptidase D	AK010581|Pepd|18624|peptidase D	D82983|Pepd|18624|peptidase D	BC086644|Pepd|18624|peptidase D
mm9_v1_chr3_+_145541951_145541971	1.10891	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr2_+_65683823_65683911	1.09875	POU5F1_SOX2{dimer}.p2	NM_153409|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	NM_178634|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	EF210820|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK039150|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK082649|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK020730|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	AK080761|Csrnp3|77771|cysteine-serine-rich nuclear protein 3	BC055701|Csrnp3|77771|cysteine-serine-rich nuclear protein 3
mm9_v1_chr11_-_17853850_17853896	1.09182	POU5F1_SOX2{dimer}.p2	BC028916|Etaa1|68145|Ewing's tumor-associated antigen 1	AK034138|Etaa1|68145|Ewing's tumor-associated antigen 1	AK019965|Etaa1|68145|Ewing's tumor-associated antigen 1	NM_026576|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr2_-_136213509_136213702	1.0805	POU5F1_SOX2{dimer}.p2	AK163530|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK032593|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK079080|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK013814|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	BC099417|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	AK077967|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7	NM_172858|Pak7|241656|p21 protein (Cdc42/Rac)-activated kinase 7
mm9_v1_chr7_-_152125521_152125630	1.07379	POU5F1_SOX2{dimer}.p2	AK005352|Ccnd1|12443|cyclin D1
mm9_v1_chr13_+_42776161_42776182	1.05685	POU5F1_SOX2{dimer}.p2	AK047654|Phactr1|218194|phosphatase and actin regulator 1	AY993932|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr3_+_66789621_66789657	1.03214	POU5F1_SOX2{dimer}.p2	AK168539|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC038303|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK004742|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK169340|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC027501|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC083123|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr13_-_23714425_23714427	1.02787	POU5F1_SOX2{dimer}.p2	BC089600|Hist1h1e|50709|histone cluster 1, H1e	NM_015787|Hist1h1e|50709|histone cluster 1, H1e
mm9_v1_chr1_-_65225583_65225732	1.01514	POU5F1_SOX2{dimer}.p2	AK087063|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK151212|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK149019|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK159173|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK160896|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK167583|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK167158|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	AK168832|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	BC088986|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble	NM_010497|Idh1|15926|isocitrate dehydrogenase 1 (NADP+), soluble
mm9_v1_chr7_+_137836116_137836140	0.986863	POU5F1_SOX2{dimer}.p2	AK165194|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr4_+_110070336_110070438	0.983549	POU5F1_SOX2{dimer}.p2	AK016502|Agbl4|78933|ATP/GTP binding protein-like 4	AK019817|Agbl4|78933|ATP/GTP binding protein-like 4	AK051109|Agbl4|78933|ATP/GTP binding protein-like 4	DQ867039|Agbl4|78933|ATP/GTP binding protein-like 4	DQ867040|Agbl4|78933|ATP/GTP binding protein-like 4	NM_001048189|Agbl4|78933|ATP/GTP binding protein-like 4	NM_030231|Agbl4|78933|ATP/GTP binding protein-like 4
mm9_v1_chr16_+_38562924_38562994	0.979705	POU5F1_SOX2{dimer}.p2	AK169127|Tmem39a|67846|transmembrane protein 39a	AK011646|Tmem39a|67846|transmembrane protein 39a	AK133638|Tmem39a|67846|transmembrane protein 39a	AK017817|Tmem39a|67846|transmembrane protein 39a	BC020318|Tmem39a|67846|transmembrane protein 39a	NM_026407|Tmem39a|67846|transmembrane protein 39a
mm9_v1_chr4_+_137549366_137549416	0.976415	POU5F1_SOX2{dimer}.p2	AK019693|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3	AK054068|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3	BC072600|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3	NM_172703|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3	AK046639|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3	BC082549|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3	BC079885|Eif4g3|230861|eukaryotic translation initiation factor 4 gamma, 3
mm9_v1_chr2_-_63936044_63936094	0.966562	POU5F1_SOX2{dimer}.p2	AF263913|Fign|60344|fidgetin	AK163474|Fign|60344|fidgetin	AK164536|Fign|60344|fidgetin	NM_021716|Fign|60344|fidgetin	AK143787|Fign|60344|fidgetin	BC059266|Fign|60344|fidgetin
mm9_v1_chr3_+_68376319_68376428	0.945777	POU5F1_SOX2{dimer}.p2	BC060529|Schip1|30953|schwannomin interacting protein 1	AK021361|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr3_-_98618351_98618365	0.930408	POU5F1_SOX2{dimer}.p2	BC053501|Hsd3b6|15497|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6	AY046512|Hsd3b6|15497|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6	AK142267|Hsd3b6|15497|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6	NM_013821|Hsd3b6|15497|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6
mm9_v1_chr4_+_95224197_95224229	0.928284	POU5F1_SOX2{dimer}.p2	NM_001113412|Fggy|75578|FGGY carbohydrate kinase domain containing	AK138439|Fggy|75578|FGGY carbohydrate kinase domain containing	AK082737|Fggy|75578|FGGY carbohydrate kinase domain containing
mm9_v1_chr5_+_93327023_93327086	0.913435	POU5F1_SOX2{dimer}.p2	NM_001077596|Shroom3|27428|shroom family member 3	AK147493|Shroom3|27428|shroom family member 3
mm9_v1_chr7_+_137836279_137836292	0.881747	POU5F1_SOX2{dimer}.p2	AK165603|Tacc2|57752|transforming, acidic coiled-coil containing protein 2
mm9_v1_chr4_+_97439119_97439136	0.863512	POU5F1_SOX2{dimer}.p2	AK161966|A130013F12Rik|320308|RIKEN cDNA A130013F12 gene
mm9_v1_chr4_-_109960078_109960115	0.842565	POU5F1_SOX2{dimer}.p2	BC052451|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AF041342|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK079088|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_001038698|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr1_-_170361525_170361683	0.840239	POU5F1_SOX2{dimer}.p2	BC002244|Pbx1|18514|pre B-cell leukemia transcription factor 1	AB221563|Pbx1|18514|pre B-cell leukemia transcription factor 1	HM369110|Pbx1|18514|pre B-cell leukemia transcription factor 1	L27453|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr4_+_13678443_13678575	0.833575	POU5F1_SOX2{dimer}.p2	NM_001111027|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr7_+_147949708_147949754	0.816204	POU5F1_SOX2{dimer}.p2	BC013451|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	NM_021282|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	DQ838976|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	DQ838977|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	X62595|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1	BC042693|Cyp2e1|13106|cytochrome P450, family 2, subfamily e, polypeptide 1
mm9_v1_chrX_+_104115963_104116162	0.792831	POU5F1_SOX2{dimer}.p2	NM_175271|Lpar4|78134|lysophosphatidic acid receptor 4	BC052178|Lpar4|78134|lysophosphatidic acid receptor 4	AK051709|Lpar4|78134|lysophosphatidic acid receptor 4	AK019967|Lpar4|78134|lysophosphatidic acid receptor 4	AK045289|Lpar4|78134|lysophosphatidic acid receptor 4	BC069178|Lpar4|78134|lysophosphatidic acid receptor 4	BC138893|Lpar4|78134|lysophosphatidic acid receptor 4	BC138894|Lpar4|78134|lysophosphatidic acid receptor 4
mm9_v1_chr2_+_25036524_25036678	0.754113	POU5F1_SOX2{dimer}.p2	BC069891|Nrarp|67122|Notch-regulated ankyrin repeat protein	AK012426|Nrarp|67122|Notch-regulated ankyrin repeat protein
mm9_v1_chr11_+_70338865_70338909	0.72787	POU5F1_SOX2{dimer}.p2	AK132042|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	AK078437|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	AK167123|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	AK167227|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	BC013897|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6
mm9_v1_chr3_+_106487904_106487904	0.727385	POU5F1_SOX2{dimer}.p2	NM_001039478|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene
mm9_v1_chr6_-_13627853_13628000	0.725461	POU5F1_SOX2{dimer}.p2	BC145708|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	BC145710|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	AK170526|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	AK046745|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene	NM_175312|B630005N14Rik|101148|RIKEN cDNA B630005N14 gene
mm9_v1_chr5_+_76958331_76958438	0.71774	POU5F1_SOX2{dimer}.p2	BC064811|Exoc1|69940|exocyst complex component 1	NM_027270|Exoc1|69940|exocyst complex component 1	AK042620|Exoc1|69940|exocyst complex component 1	AK155980|Exoc1|69940|exocyst complex component 1	BC087543|Exoc1|69940|exocyst complex component 1	BC024678|Exoc1|69940|exocyst complex component 1
mm9_v1_chr2_+_79547936_79548278	0.710575	POU5F1_SOX2{dimer}.p2	AK051670|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	NM_172420|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC120706|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC132149|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK051449|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK157871|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK083940|Ppp1r1c|75276|protein phosphatase 1, regulatory (inhibitor) subunit 1C
mm9_v1_chr14_+_76904316_76904371	0.706466	POU5F1_SOX2{dimer}.p2	AK147039|Tsc22d1|21807|TSC22 domain family, member 1	NM_009366|Tsc22d1|21807|TSC22 domain family, member 1	AK145204|Tsc22d1|21807|TSC22 domain family, member 1	AK135277|Tsc22d1|21807|TSC22 domain family, member 1	AK135282|Tsc22d1|21807|TSC22 domain family, member 1	AK135514|Tsc22d1|21807|TSC22 domain family, member 1	AK148732|Tsc22d1|21807|TSC22 domain family, member 1	X62940|Tsc22d1|21807|TSC22 domain family, member 1	AK179000|Tsc22d1|21807|TSC22 domain family, member 1	BC026703|Tsc22d1|21807|TSC22 domain family, member 1
mm9_v1_chr1_+_157887985_157888091	0.696011	POU5F1_SOX2{dimer}.p2	NM_001160181|Tor1aip2|240832|torsin A interacting protein 2	NM_022329|Tor1aip2|240832|torsin A interacting protein 2	AK152137|Tor1aip2|240832|torsin A interacting protein 2	AK080959|Tor1aip2|240832|torsin A interacting protein 2	AK150303|Tor1aip2|240832|torsin A interacting protein 2	AK151453|Tor1aip2|240832|torsin A interacting protein 2	AJ251363|Tor1aip2|240832|torsin A interacting protein 2	BC064017|Tor1aip2|240832|torsin A interacting protein 2	BC092059|Tor1aip2|240832|torsin A interacting protein 2	AK216254|Tor1aip2|240832|torsin A interacting protein 2	BC039927|Tor1aip2|240832|torsin A interacting protein 2	AK003852|Tor1aip2|240832|torsin A interacting protein 2	AK032697|Tor1aip2|240832|torsin A interacting protein 2	BC053726|Tor1aip2|240832|torsin A interacting protein 2	AK182358|Tor1aip2|240832|torsin A interacting protein 2	AK203799|Tor1aip2|240832|torsin A interacting protein 2	AK212068|Tor1aip2|240832|torsin A interacting protein 2	AK212760|Tor1aip2|240832|torsin A interacting protein 2	AK214292|Tor1aip2|240832|torsin A interacting protein 2	AK218632|Tor1aip2|240832|torsin A interacting protein 2	AK219881|Tor1aip2|240832|torsin A interacting protein 2	AK177027|Tor1aip2|240832|torsin A interacting protein 2
mm9_v1_chr17_-_35810624_35810662	0.653583	POU5F1_SOX2{dimer}.p2	AF054823|Gtf2h4|14885|general transcription factor II H, polypeptide 4	NM_010364|Gtf2h4|14885|general transcription factor II H, polypeptide 4	BC055889|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK079456|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK088296|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK144680|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK146112|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK149320|Gtf2h4|14885|general transcription factor II H, polypeptide 4
mm9_v1_chr4_-_12015073_12015153	0.652143	POU5F1_SOX2{dimer}.p2	AK017238|Tmem67|329795|transmembrane protein 67	AK039177|Tmem67|329795|transmembrane protein 67	AK042835|Tmem67|329795|transmembrane protein 67	AK133059|Tmem67|329795|transmembrane protein 67	AK045429|Tmem67|329795|transmembrane protein 67	NM_177861|Tmem67|329795|transmembrane protein 67	AK077246|Tmem67|329795|transmembrane protein 67
mm9_v1_chr6_+_142246944_142246973	0.648054	POU5F1_SOX2{dimer}.p2	NM_010491|Iapp|15874|islet amyloid polypeptide	BC027527|Iapp|15874|islet amyloid polypeptide
mm9_v1_chr15_-_96861590_96861647	0.64206	POU5F1_SOX2{dimer}.p2	BC024072|Slc38a4|69354|solute carrier family 38, member 4	BC024123|Slc38a4|69354|solute carrier family 38, member 4	AB055004|Slc38a4|69354|solute carrier family 38, member 4
mm9_v1_chrX_+_35542969_35543017	0.628703	POU5F1_SOX2{dimer}.p2	NM_001079513|Zbtb33|56805|zinc finger and BTB domain containing 33	NM_020256|Zbtb33|56805|zinc finger and BTB domain containing 33	AK087417|Zbtb33|56805|zinc finger and BTB domain containing 33	AK089423|Zbtb33|56805|zinc finger and BTB domain containing 33	AF097416|Zbtb33|56805|zinc finger and BTB domain containing 33
mm9_v1_chr2_-_28477437_28477507	0.601484	POU5F1_SOX2{dimer}.p2	BC132365|Gfi1b|14582|growth factor independent 1B	BC132367|Gfi1b|14582|growth factor independent 1B	BC145238|Gfi1b|14582|growth factor independent 1B	AF017275|Gfi1b|14582|growth factor independent 1B	BC052654|Gfi1b|14582|growth factor independent 1B	NM_001160406|Gfi1b|14582|growth factor independent 1B	NM_008114|Gfi1b|14582|growth factor independent 1B	AK157262|Gfi1b|14582|growth factor independent 1B
mm9_v1_chr11_+_62692976_62693095	0.592308	POU5F1_SOX2{dimer}.p2	AK077277|Fam18b|67510|family with sequence similarity 18, member B	NM_026210|Fam18b|67510|family with sequence similarity 18, member B	AK150936|Fam18b|67510|family with sequence similarity 18, member B	BC115504|Fam18b|67510|family with sequence similarity 18, member B	BC115505|Fam18b|67510|family with sequence similarity 18, member B	AK007707|Fam18b|67510|family with sequence similarity 18, member B	AK017572|Fam18b|67510|family with sequence similarity 18, member B
mm9_v1_chr11_-_86071041_86071069	0.57866	POU5F1_SOX2{dimer}.p2	AK037055|Ints2|70422|integrator complex subunit 2	AK129323|Ints2|70422|integrator complex subunit 2	NM_027421|Ints2|70422|integrator complex subunit 2
mm9_v1_chr2_+_80457201_80457422	0.578567	POU5F1_SOX2{dimer}.p2	AF237618|Dusp19|68082|dual specificity phosphatase 19	NM_024438|Dusp19|68082|dual specificity phosphatase 19	AK010127|Dusp19|68082|dual specificity phosphatase 19	AK077871|Dusp19|68082|dual specificity phosphatase 19	AK170170|Dusp19|68082|dual specificity phosphatase 19	AK018369|Dusp19|68082|dual specificity phosphatase 19	AB051896|Dusp19|68082|dual specificity phosphatase 19	AK049927|Dusp19|68082|dual specificity phosphatase 19	AB038769|Dusp19|68082|dual specificity phosphatase 19	BC021591|Dusp19|68082|dual specificity phosphatase 19	AK083610|Dusp19|68082|dual specificity phosphatase 19
mm9_v1_chr1_-_167865030_167865141	0.572655	POU5F1_SOX2{dimer}.p2	AJ296212|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_198933|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_198934|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489475|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489474|Pou2f1|18986|POU domain, class 2, transcription factor 1	X56230|Pou2f1|18986|POU domain, class 2, transcription factor 1
mm9_v1_chr3_-_81779636_81779675	0.54143	POU5F1_SOX2{dimer}.p2	U24493|Tdo2|56720|tryptophan 2,3-dioxygenase	BC018390|Tdo2|56720|tryptophan 2,3-dioxygenase	NM_019911|Tdo2|56720|tryptophan 2,3-dioxygenase	AK132271|Tdo2|56720|tryptophan 2,3-dioxygenase
mm9_v1_chr14_+_56197282_56197411	0.531033	POU5F1_SOX2{dimer}.p2	AK150708|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	AK150975|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	AK019390|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	BC088981|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	BC035549|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	D87909|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	NM_011189|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	AK008514|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha	U60328|Psme1|19186|proteasome (prosome, macropain) 28 subunit, alpha
mm9_v1_chr7_-_48754777_48754790	0.514115	POU5F1_SOX2{dimer}.p2	BC089503|AW146154|101835|expressed sequence AW146154
mm9_v1_chr19_+_40734282_40734322	0.502952	POU5F1_SOX2{dimer}.p2	AK030601|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	NM_009848|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	BC011278|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1	AF037366|Entpd1|12495|ectonucleoside triphosphate diphosphohydrolase 1
mm9_v1_chr7_-_152125661_152125812	0.501575	POU5F1_SOX2{dimer}.p2	AK170833|Ccnd1|12443|cyclin D1	BC060172|Ccnd1|12443|cyclin D1	BC044841|Ccnd1|12443|cyclin D1	AK149905|Ccnd1|12443|cyclin D1	S78355|Ccnd1|12443|cyclin D1	AK053348|Ccnd1|12443|cyclin D1	AK164997|Ccnd1|12443|cyclin D1	M64403|Ccnd1|12443|cyclin D1	AK017834|Ccnd1|12443|cyclin D1
mm9_v1_chr2_+_174276095_174276197	0.495638	POU5F1_SOX2{dimer}.p2	BC147687|Tubb1|545486|tubulin, beta 1	BC147698|Tubb1|545486|tubulin, beta 1	NM_001080971|Tubb1|545486|tubulin, beta 1	BC147322|Tubb1|545486|tubulin, beta 1	BC147323|Tubb1|545486|tubulin, beta 1
mm9_v1_chr19_-_8872918_8873082	0.484725	POU5F1_SOX2{dimer}.p2	BC055278|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK010687|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK020719|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK013134|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK017473|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK011627|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	NM_026329|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	BC005580|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G	AK007892|Polr2g|67710|polymerase (RNA) II (DNA directed) polypeptide G
mm9_v1_chr11_+_100406921_100407015	0.476734	POU5F1_SOX2{dimer}.p2	BC050805|Ttc25|74407|tetratricopeptide repeat domain 25	NM_028918|Ttc25|74407|tetratricopeptide repeat domain 25	AK161541|Ttc25|74407|tetratricopeptide repeat domain 25	AK162855|Ttc25|74407|tetratricopeptide repeat domain 25	AK016657|Ttc25|74407|tetratricopeptide repeat domain 25
mm9_v1_chr7_+_74792295_74792398	0.4725	POU5F1_SOX2{dimer}.p2	AK086049|Ttc23|67009|tetratricopeptide repeat domain 23	AK165626|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168475|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168476|Ttc23|67009|tetratricopeptide repeat domain 23	NM_001168477|Ttc23|67009|tetratricopeptide repeat domain 23	NM_025905|Ttc23|67009|tetratricopeptide repeat domain 23	AK141754|Ttc23|67009|tetratricopeptide repeat domain 23	BC038179|Ttc23|67009|tetratricopeptide repeat domain 23	AK005431|Ttc23|67009|tetratricopeptide repeat domain 23	AK084269|Ttc23|67009|tetratricopeptide repeat domain 23	AK166555|Ttc23|67009|tetratricopeptide repeat domain 23	AK166613|Ttc23|67009|tetratricopeptide repeat domain 23
mm9_v1_chr8_+_38056628_38056675	0.467236	POU5F1_SOX2{dimer}.p2	NM_001039220|AI429214|621080|expressed sequence AI429214	AK161334|AI429214|621080|expressed sequence AI429214	AK132736|AI429214|621080|expressed sequence AI429214	BC150875|AI429214|621080|expressed sequence AI429214
mm9_v1_chrX_+_131252456_131252527	0.465826	POU5F1_SOX2{dimer}.p2	NM_001166377|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166378|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166379|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_001166380|Armcx1|78248|armadillo repeat containing, X-linked 1	NM_030066|Armcx1|78248|armadillo repeat containing, X-linked 1	BC026488|Armcx1|78248|armadillo repeat containing, X-linked 1	AK147002|Armcx1|78248|armadillo repeat containing, X-linked 1	BC068228|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr4_-_82698070_82698070	0.462836	POU5F1_SOX2{dimer}.p2	AB160986|Frem1|329872|Fras1 related extracellular matrix protein 1	NM_001198811|Frem1|329872|Fras1 related extracellular matrix protein 1
mm9_v1_chr2_+_154959216_154959300	0.461398	POU5F1_SOX2{dimer}.p2	NM_008395|Itch|16396|itchy, E3 ubiquitin protein ligase	AK082003|Itch|16396|itchy, E3 ubiquitin protein ligase	AK163006|Itch|16396|itchy, E3 ubiquitin protein ligase	AK141800|Itch|16396|itchy, E3 ubiquitin protein ligase	AK037940|Itch|16396|itchy, E3 ubiquitin protein ligase	BC062934|Itch|16396|itchy, E3 ubiquitin protein ligase	AK020167|Itch|16396|itchy, E3 ubiquitin protein ligase	AK220164|Itch|16396|itchy, E3 ubiquitin protein ligase	AK048303|Itch|16396|itchy, E3 ubiquitin protein ligase	BC064678|Itch|16396|itchy, E3 ubiquitin protein ligase	AF037454|Itch|16396|itchy, E3 ubiquitin protein ligase
mm9_v1_chr5_+_149996135_149996309	0.460619	POU5F1_SOX2{dimer}.p2	NM_001013378|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115149|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115150|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115151|Uspl1|231915|ubiquitin specific peptidase like 1	NM_001115153|Uspl1|231915|ubiquitin specific peptidase like 1	AK050969|Uspl1|231915|ubiquitin specific peptidase like 1	AK145409|Uspl1|231915|ubiquitin specific peptidase like 1	BC028849|Uspl1|231915|ubiquitin specific peptidase like 1	AK168981|Uspl1|231915|ubiquitin specific peptidase like 1	AK146820|Uspl1|231915|ubiquitin specific peptidase like 1	AK168702|Uspl1|231915|ubiquitin specific peptidase like 1	AK088787|Uspl1|231915|ubiquitin specific peptidase like 1	AK161654|Uspl1|231915|ubiquitin specific peptidase like 1	BC086664|Uspl1|231915|ubiquitin specific peptidase like 1	AK179867|Uspl1|231915|ubiquitin specific peptidase like 1
mm9_v1_chr8_+_112514335_112514362	0.458073	POU5F1_SOX2{dimer}.p2	NM_146214|Tat|234724|tyrosine aminotransferase	AK090244|Tat|234724|tyrosine aminotransferase	AK149383|Tat|234724|tyrosine aminotransferase	AK149526|Tat|234724|tyrosine aminotransferase	BC030728|Tat|234724|tyrosine aminotransferase	BC024120|Tat|234724|tyrosine aminotransferase	BC028821|Tat|234724|tyrosine aminotransferase	BC023949|Tat|234724|tyrosine aminotransferase	BC030729|Tat|234724|tyrosine aminotransferase
mm9_v1_chr5_-_100392845_100392900	0.457644	POU5F1_SOX2{dimer}.p2	AK053251|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr17_+_9181197_9181252	0.45639	POU5F1_SOX2{dimer}.p2	NM_025851|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	AK161278|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	AK005830|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	BC050753|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	AK006307|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	AK015220|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene	BC061078|1700010I14Rik|66931|RIKEN cDNA 1700010I14 gene
mm9_v1_chr2_-_44968728_44968798	0.453729	POU5F1_SOX2{dimer}.p2	AJ535782|Zeb2|24136|zinc finger E-box binding homeobox 2	AK031541|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535780|Zeb2|24136|zinc finger E-box binding homeobox 2	NM_015753|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr9_+_46036799_46036808	0.4462	POU5F1_SOX2{dimer}.p2	L04151|Apoa1|11806|apolipoprotein A-I	BC091745|Apoa1|11806|apolipoprotein A-I	BC019837|Apoa1|11806|apolipoprotein A-I	BC012253|Apoa1|11806|apolipoprotein A-I
mm9_v1_chr3_-_115832278_115832299	0.441664	POU5F1_SOX2{dimer}.p2	CT010373|Vcam1|22329|vascular cell adhesion molecule 1	X67783|Vcam1|22329|vascular cell adhesion molecule 1
mm9_v1_chr13_+_23673433_23673471	0.435217	POU5F1_SOX2{dimer}.p2	NM_175654|Hist1h4d|319156|histone cluster 1, H4d	BC119611|Hist1h4d|319156|histone cluster 1, H4d
mm9_v1_chr12_-_32398730_32398790	0.432803	POU5F1_SOX2{dimer}.p2	AK140577|Gpr22|73010|G protein-coupled receptor 22	AK034194|Gpr22|73010|G protein-coupled receptor 22	AK013755|Gpr22|73010|G protein-coupled receptor 22	AK048077|Gpr22|73010|G protein-coupled receptor 22	AK141569|Gpr22|73010|G protein-coupled receptor 22	BC089509|Gpr22|73010|G protein-coupled receptor 22	NM_175191|Gpr22|73010|G protein-coupled receptor 22
mm9_v1_chr19_+_20676453_20676504	0.43173	POU5F1_SOX2{dimer}.p2	M74570|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC044729|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC054386|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	NM_013467|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	BC035322|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1	S75713|Aldh1a1|11668|aldehyde dehydrogenase family 1, subfamily A1
mm9_v1_chr8_+_56040080_56040120	0.426913	POU5F1_SOX2{dimer}.p2	NM_153581|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr11_-_119971500_119971623	0.413636	POU5F1_SOX2{dimer}.p2	AK195379|Slc38a10|72055|solute carrier family 38, member 10	AK176940|Slc38a10|72055|solute carrier family 38, member 10	AK182790|Slc38a10|72055|solute carrier family 38, member 10	BC055017|Slc38a10|72055|solute carrier family 38, member 10
mm9_v1_chr7_-_30691111_30691122	0.407561	POU5F1_SOX2{dimer}.p2	AK147732|Zfp27|22689|zinc finger protein 27	NM_001037707|Zfp27|22689|zinc finger protein 27	NM_011754|Zfp27|22689|zinc finger protein 27
mm9_v1_chr1_-_173171150_173171196	0.402134	POU5F1_SOX2{dimer}.p2	AK188143|Ndufs2|226646|NADH dehydrogenase (ubiquinone) Fe-S protein 2
mm9_v1_chr2_-_163450863_163450871	0.402052	POU5F1_SOX2{dimer}.p2	AK003471|Serinc3|26943|serine incorporator 3
mm9_v1_chr19_-_40261753_40261779	0.387141	POU5F1_SOX2{dimer}.p2	BC022151|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC023894|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	AY227736|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC034831|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	BC016494|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	AK050082|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70	NM_145499|Cyp2c70|226105|cytochrome P450, family 2, subfamily c, polypeptide 70
mm9_v1_chr19_-_34601874_34601967	0.384984	POU5F1_SOX2{dimer}.p2	AK154804|Lipa|16889|lysosomal acid lipase A	BC058564|Lipa|16889|lysosomal acid lipase A	AK088659|Lipa|16889|lysosomal acid lipase A	AK149791|Lipa|16889|lysosomal acid lipase A	AK169567|Lipa|16889|lysosomal acid lipase A	AK153624|Lipa|16889|lysosomal acid lipase A	AK083099|Lipa|16889|lysosomal acid lipase A	AK164007|Lipa|16889|lysosomal acid lipase A	NM_001111100|Lipa|16889|lysosomal acid lipase A	NM_021460|Lipa|16889|lysosomal acid lipase A
mm9_v1_chrX_+_131252542_131252558	0.383576	POU5F1_SOX2{dimer}.p2	AK019405|Armcx1|78248|armadillo repeat containing, X-linked 1	BC021410|Armcx1|78248|armadillo repeat containing, X-linked 1
mm9_v1_chr15_+_6395311_6395349	0.381218	POU5F1_SOX2{dimer}.p2	BC011137|C9|12279|complement component 9	NM_013485|C9|12279|complement component 9
mm9_v1_chr11_-_110112926_110113089	0.373583	POU5F1_SOX2{dimer}.p2	BC132417|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	BC132419|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK053384|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AF498361|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK042934|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK018242|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK040652|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166556|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166557|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_147218|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6
mm9_v1_chr1_+_176102903_176103041	0.3714	POU5F1_SOX2{dimer}.p2	NM_011465|Spna1|20739|spectrin alpha 1	AK142860|Spna1|20739|spectrin alpha 1	U87455|Spna1|20739|spectrin alpha 1	AF093576|Spna1|20739|spectrin alpha 1	BC150747|Spna1|20739|spectrin alpha 1
mm9_v1_chr11_-_121084021_121084125	0.36913	POU5F1_SOX2{dimer}.p2	AK215969|BC017643|217370|cDNA sequence BC017643
mm9_v1_chr8_-_95803605_95803656	0.363186	POU5F1_SOX2{dimer}.p2	BC013479|Ces1f|234564|carboxylesterase 1F	AK136491|Ces1f|234564|carboxylesterase 1F	NM_144930|Ces1f|234564|carboxylesterase 1F
mm9_v1_chr19_-_40346058_40346105	0.359811	POU5F1_SOX2{dimer}.p2	AK158992|Pdlim1|54132|PDZ and LIM domain 1 (elfin)	NM_016861|Pdlim1|54132|PDZ and LIM domain 1 (elfin)
mm9_v1_chr2_+_87366184_87366358	0.352812	POU5F1_SOX2{dimer}.p2	BC090254|Srp9|27058|signal recognition particle 9
mm9_v1_chr3_+_89006824_89006905	0.348127	POU5F1_SOX2{dimer}.p2	AK082767|Gba|14466|glucosidase, beta, acid	NM_001077411|Gba|14466|glucosidase, beta, acid	AK201806|Gba|14466|glucosidase, beta, acid	AK166198|Gba|14466|glucosidase, beta, acid	BC006663|Gba|14466|glucosidase, beta, acid	NM_008094|Gba|14466|glucosidase, beta, acid	AK152745|Gba|14466|glucosidase, beta, acid
mm9_v1_chr5_-_111239017_111239099	0.345204	POU5F1_SOX2{dimer}.p2	BC059835|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	AK148317|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	AK156534|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	BC057121|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)	NM_009469|Ulk1|22241|Unc-51 like kinase 1 (C. elegans)
mm9_v1_chr19_+_31943250_31943302	0.342593	POU5F1_SOX2{dimer}.p2	NM_001081074|A1cf|69865|APOBEC1 complementation factor	AY566862|A1cf|69865|APOBEC1 complementation factor	AY566863|A1cf|69865|APOBEC1 complementation factor	AY566864|A1cf|69865|APOBEC1 complementation factor	AK007970|A1cf|69865|APOBEC1 complementation factor	BC089622|A1cf|69865|APOBEC1 complementation factor
mm9_v1_chr1_+_141398282_141398309	0.342258	POU5F1_SOX2{dimer}.p2	NM_031164|F13b|14060|coagulation factor XIII, beta subunit	AK149397|F13b|14060|coagulation factor XIII, beta subunit	D10071|F13b|14060|coagulation factor XIII, beta subunit	BC030166|F13b|14060|coagulation factor XIII, beta subunit
mm9_v1_chr2_-_91284827_91284865	0.341892	POU5F1_SOX2{dimer}.p2	AK018339|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	BC049648|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene
mm9_v1_chr11_-_70223528_70223535	0.336324	POU5F1_SOX2{dimer}.p2	AK005027|Pelp1|75273|proline, glutamic acid and leucine rich protein 1	AK016197|Pelp1|75273|proline, glutamic acid and leucine rich protein 1	AK128966|Pelp1|75273|proline, glutamic acid and leucine rich protein 1	NM_029231|Pelp1|75273|proline, glutamic acid and leucine rich protein 1
mm9_v1_chr6_+_34659440_34659540	0.333703	POU5F1_SOX2{dimer}.p2	NM_145575|Cald1|109624|caldesmon 1	BC019435|Cald1|109624|caldesmon 1	AK014755|Cald1|109624|caldesmon 1	AK160593|Cald1|109624|caldesmon 1
mm9_v1_chrX_-_71598873_71598966	0.33356	POU5F1_SOX2{dimer}.p2	AK134624|Lage3|66192|L antigen family, member 3	BC027305|Lage3|66192|L antigen family, member 3	AK004210|Lage3|66192|L antigen family, member 3	AK002539|Lage3|66192|L antigen family, member 3	NM_025410|Lage3|66192|L antigen family, member 3
mm9_v1_chr9_-_113563906_113564041	0.331348	POU5F1_SOX2{dimer}.p2	AK199870|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr13_-_111070225_111070335	0.329565	POU5F1_SOX2{dimer}.p2	AB232589|Rab3c|67295|RAB3C, member RAS oncogene family	AF312037|Rab3c|67295|RAB3C, member RAS oncogene family	AJ310532|Rab3c|67295|RAB3C, member RAS oncogene family	BC114335|Rab3c|67295|RAB3C, member RAS oncogene family	AY026947|Rab3c|67295|RAB3C, member RAS oncogene family	AK079574|Rab3c|67295|RAB3C, member RAS oncogene family	AK148904|Rab3c|67295|RAB3C, member RAS oncogene family	AK014132|Rab3c|67295|RAB3C, member RAS oncogene family
mm9_v1_chr5_+_129106980_129107017	0.328504	POU5F1_SOX2{dimer}.p2	AY509002|Fzd10|93897|frizzled homolog 10 (Drosophila)	NM_175284|Fzd10|93897|frizzled homolog 10 (Drosophila)	BC117759|Fzd10|93897|frizzled homolog 10 (Drosophila)
mm9_v1_chr3_-_32264572_32264614	0.325315	POU5F1_SOX2{dimer}.p2	NM_009517|Zmat3|22401|zinc finger matrin type 3	BC023726|Zmat3|22401|zinc finger matrin type 3
mm9_v1_chrX_-_163645313_163645419	0.324446	POU5F1_SOX2{dimer}.p2	AK205579|Tmsb4x|19241|thymosin, beta 4, X chromosome
mm9_v1_chr18_+_59222034_59222186	0.321331	POU5F1_SOX2{dimer}.p2	NM_001167925|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	NM_173759|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK080452|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	AK048493|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene	BC075669|A730017C20Rik|225583|RIKEN cDNA A730017C20 gene
mm9_v1_chr11_-_70223517_70223527	0.317374	POU5F1_SOX2{dimer}.p2	BC090620|Pelp1|75273|proline, glutamic acid and leucine rich protein 1
mm9_v1_chr3_+_51297898_51297938	0.313037	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr1_+_97230610_97230736	0.307425	POU5F1_SOX2{dimer}.p2	AK152164|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chr8_+_4613144_4613169	0.306431	POU5F1_SOX2{dimer}.p2	BC003267|Zfp958|233987|zinc finger protein 958	AK037596|Zfp958|233987|zinc finger protein 958	AK037083|Zfp958|233987|zinc finger protein 958	NM_145591|Zfp958|233987|zinc finger protein 958
mm9_v1_chr3_+_97432773_97432782	0.305271	POU5F1_SOX2{dimer}.p2	AK133675|Fmo5|14263|flavin containing monooxygenase 5
mm9_v1_chr4_+_122731563_122731731	0.29548	POU5F1_SOX2{dimer}.p2	AK188355|Trit1|66966|tRNA isopentenyltransferase 1	AK219389|Trit1|66966|tRNA isopentenyltransferase 1	AK189511|Trit1|66966|tRNA isopentenyltransferase 1
mm9_v1_chr13_-_25112189_25112247	0.29485	POU5F1_SOX2{dimer}.p2	NM_001013389|Mrs2|380836|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)
mm9_v1_chr3_+_145784635_145784876	0.29224	POU5F1_SOX2{dimer}.p2	AK030819|Mcoln3|171166|mucolipin 3	AK035029|Mcoln3|171166|mucolipin 3	AK033008|Mcoln3|171166|mucolipin 3	AF475086|Mcoln3|171166|mucolipin 3	BC106856|Mcoln3|171166|mucolipin 3	BC106857|Mcoln3|171166|mucolipin 3	NM_134160|Mcoln3|171166|mucolipin 3	AY083531|Mcoln3|171166|mucolipin 3	AK191060|Mcoln3|171166|mucolipin 3	AK202150|Mcoln3|171166|mucolipin 3
mm9_v1_chr1_-_141755209_141755302	0.291215	POU5F1_SOX2{dimer}.p2	AJ565908|BC026782|545366|cDNA sequence BC026782	M29007|BC026782|545366|cDNA sequence BC026782	AK149511|BC026782|545366|cDNA sequence BC026782	NM_001025575|BC026782|545366|cDNA sequence BC026782
mm9_v1_chr3_+_129539656_129539716	0.288567	POU5F1_SOX2{dimer}.p2	NM_007686|Cfi|12630|complement component factor i	U47810|Cfi|12630|complement component factor i	BC150751|Cfi|12630|complement component factor i
mm9_v1_chr4_+_100741586_100741642	0.285359	POU5F1_SOX2{dimer}.p2	AK040404|Raver2|242570|ribonucleoprotein, PTB-binding 2	BC055329|Raver2|242570|ribonucleoprotein, PTB-binding 2	NM_183024|Raver2|242570|ribonucleoprotein, PTB-binding 2
mm9_v1_chr7_-_152117780_152117864	0.284344	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr3_+_83570228_83570453	0.27927	POU5F1_SOX2{dimer}.p2	NM_009144|Sfrp2|20319|secreted frizzled-related protein 2	U88567|Sfrp2|20319|secreted frizzled-related protein 2	AK147091|Sfrp2|20319|secreted frizzled-related protein 2	BC014722|Sfrp2|20319|secreted frizzled-related protein 2	AK138252|Sfrp2|20319|secreted frizzled-related protein 2	D50462|Sfrp2|20319|secreted frizzled-related protein 2
mm9_v1_chr1_-_167523348_167523717	0.277018	POU5F1_SOX2{dimer}.p2	AK188720|Mpzl1|68481|myelin protein zero-like 1	AK198363|Mpzl1|68481|myelin protein zero-like 1	AK200888|Mpzl1|68481|myelin protein zero-like 1	AK206772|Mpzl1|68481|myelin protein zero-like 1	AK210071|Mpzl1|68481|myelin protein zero-like 1	AK214871|Mpzl1|68481|myelin protein zero-like 1	AK215062|Mpzl1|68481|myelin protein zero-like 1	AK218959|Mpzl1|68481|myelin protein zero-like 1	AK003513|Mpzl1|68481|myelin protein zero-like 1
mm9_v1_chr12_-_100688283_100688306	0.263924	POU5F1_SOX2{dimer}.p2	NM_183186|Foxn3|71375|forkhead box N3	AK148970|Foxn3|71375|forkhead box N3
mm9_v1_chr19_-_25036047_25036105	0.262702	POU5F1_SOX2{dimer}.p2	BC018472|Cbwd1|226043|COBW domain containing 1	AK076027|Cbwd1|226043|COBW domain containing 1	BC053745|Cbwd1|226043|COBW domain containing 1	AK132291|Cbwd1|226043|COBW domain containing 1	NM_146097|Cbwd1|226043|COBW domain containing 1
mm9_v1_chr7_-_148141821_148141901	0.262319	POU5F1_SOX2{dimer}.p2	BC002102|Ifitm2|80876|interferon induced transmembrane protein 2	BC084679|Ifitm2|80876|interferon induced transmembrane protein 2	NM_030694|Ifitm2|80876|interferon induced transmembrane protein 2	AY082486|Ifitm2|80876|interferon induced transmembrane protein 2	AK141392|Ifitm2|80876|interferon induced transmembrane protein 2
mm9_v1_chr14_+_79797747_79797817	0.261578	POU5F1_SOX2{dimer}.p2	AK043981|Mtrf1|211253|mitochondrial translational release factor 1	AK051834|Mtrf1|211253|mitochondrial translational release factor 1
mm9_v1_chr1_-_140071818_140071883	0.260252	POU5F1_SOX2{dimer}.p2	BC131655|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK088215|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	BC028512|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	M14342|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK154893|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK171802|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	AK054056|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_001111316|Ptprc|19264|protein tyrosine phosphatase, receptor type, C	NM_011210|Ptprc|19264|protein tyrosine phosphatase, receptor type, C
mm9_v1_chr1_-_167932735_167932770	0.256148	POU5F1_SOX2{dimer}.p2	X68363|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68362|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489477|Pou2f1|18986|POU domain, class 2, transcription factor 1	AJ489478|Pou2f1|18986|POU domain, class 2, transcription factor 1	BC066201|Pou2f1|18986|POU domain, class 2, transcription factor 1	X68364|Pou2f1|18986|POU domain, class 2, transcription factor 1	AF508939|Pou2f1|18986|POU domain, class 2, transcription factor 1	AY177625|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK044830|Pou2f1|18986|POU domain, class 2, transcription factor 1	AK028237|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_011137|Pou2f1|18986|POU domain, class 2, transcription factor 1	NM_198932|Pou2f1|18986|POU domain, class 2, transcription factor 1
mm9_v1_chr7_-_24993103_24993167	0.254389	POU5F1_SOX2{dimer}.p2	BC005456|Zfp111|56707|zinc finger protein 111	AK135436|Zfp111|56707|zinc finger protein 111	NM_019940|Zfp111|56707|zinc finger protein 111
mm9_v1_chr15_+_80629020_80629144	0.251961	POU5F1_SOX2{dimer}.p2	NM_177124|Tnrc6b|213988|trinucleotide repeat containing 6b	AK051922|Tnrc6b|213988|trinucleotide repeat containing 6b	BC068158|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr18_+_37854011_37854154	0.251377	POU5F1_SOX2{dimer}.p2	AK043161|Pcdhga5|93713|protocadherin gamma subfamily A, 5	BC057404|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AK043491|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AY013799|Pcdhga5|93713|protocadherin gamma subfamily A, 5	NM_033588|Pcdhga5|93713|protocadherin gamma subfamily A, 5
mm9_v1_chr9_-_108469265_108469296	0.250114	POU5F1_SOX2{dimer}.p2	AK005252|Ndufaf3|66706|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3	AK014634|Ndufaf3|66706|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3
mm9_v1_chr2_-_149962381_149962433	0.247239	POU5F1_SOX2{dimer}.p2	AF242378|Zfp120|104348|zinc finger protein 120	BC141128|Zfp120|104348|zinc finger protein 120	AK033399|Zfp120|104348|zinc finger protein 120	AF211867|Zfp120|104348|zinc finger protein 120	AF211868|Zfp120|104348|zinc finger protein 120	AF211869|Zfp120|104348|zinc finger protein 120	NM_023266|Zfp120|104348|zinc finger protein 120	NM_181266|Zfp120|104348|zinc finger protein 120	AK132318|Zfp120|104348|zinc finger protein 120
mm9_v1_chr9_-_82826139_82826181	0.24711	POU5F1_SOX2{dimer}.p2	BC068022|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr9_-_121825422_121825428	0.245568	POU5F1_SOX2{dimer}.p2	NM_010012|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1
mm9_v1_chr6_+_73198498_73198722	0.244365	POU5F1_SOX2{dimer}.p2	NM_019879|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK088888|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK005080|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK087390|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK002754|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AF144101|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK139288|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	BC011087|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit	AK184184|Suclg1|56451|succinate-CoA ligase, GDP-forming, alpha subunit
mm9_v1_chr5_-_31495457_31495511	0.23358	POU5F1_SOX2{dimer}.p2	M98036|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta	NM_001127355|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta	NM_001127356|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta	NM_010122|Eif2b4|13667|eukaryotic translation initiation factor 2B, subunit 4 delta
mm9_v1_chrX_+_162608411_162608448	0.233412	POU5F1_SOX2{dimer}.p2	AK045118|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK160583|Gemin8|237221|gem (nuclear organelle) associated protein 8	NM_146238|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK085045|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK037580|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK047511|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK053774|Gemin8|237221|gem (nuclear organelle) associated protein 8
mm9_v1_chr6_-_134837738_134837876	0.233349	POU5F1_SOX2{dimer}.p2	U46923|Gpr19|14760|G protein-coupled receptor 19	BC050187|Gpr19|14760|G protein-coupled receptor 19	NM_001167697|Gpr19|14760|G protein-coupled receptor 19	NM_001167699|Gpr19|14760|G protein-coupled receptor 19	NM_008157|Gpr19|14760|G protein-coupled receptor 19
mm9_v1_chr11_-_102546084_102546176	0.231651	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr12_+_87423503_87423572	0.231528	POU5F1_SOX2{dimer}.p2	AK006115|1700019E19Rik|76411|RIKEN cDNA 1700019E19 gene	NM_029601|1700019E19Rik|76411|RIKEN cDNA 1700019E19 gene	BC038915|1700019E19Rik|76411|RIKEN cDNA 1700019E19 gene	BC034668|1700019E19Rik|76411|RIKEN cDNA 1700019E19 gene
mm9_v1_chr3_-_78985249_78985262	0.226871	POU5F1_SOX2{dimer}.p2	AK037061|Rapgef2|76089|Rap guanine nucleotide exchange factor (GEF) 2
mm9_v1_chr18_+_37839910_37840111	0.223319	POU5F1_SOX2{dimer}.p2	BC054741|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	BC098367|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	AY013804|Pcdhgb1|93699|protocadherin gamma subfamily B, 1	NM_033574|Pcdhgb1|93699|protocadherin gamma subfamily B, 1
mm9_v1_chr3_+_67234003_67234103	0.223151	POU5F1_SOX2{dimer}.p2	NM_138591|Gfm1|28030|G elongation factor, mitochondrial 1	AK033214|Gfm1|28030|G elongation factor, mitochondrial 1	BC013093|Gfm1|28030|G elongation factor, mitochondrial 1	BC031772|Gfm1|28030|G elongation factor, mitochondrial 1	AF315511|Gfm1|28030|G elongation factor, mitochondrial 1
mm9_v1_chr5_+_17468366_17468438	0.222541	POU5F1_SOX2{dimer}.p2	BC147449|Gnat3|242851|guanine nucleotide binding protein, alpha transducing 3	BC147466|Gnat3|242851|guanine nucleotide binding protein, alpha transducing 3	AK040065|Gnat3|242851|guanine nucleotide binding protein, alpha transducing 3	NM_001081143|Gnat3|242851|guanine nucleotide binding protein, alpha transducing 3	BC147839|Gnat3|242851|guanine nucleotide binding protein, alpha transducing 3	BC147841|Gnat3|242851|guanine nucleotide binding protein, alpha transducing 3
mm9_v1_chr17_-_35975148_35975258	0.217211	POU5F1_SOX2{dimer}.p2	BC003825|Tubb5|22154|tubulin, beta 5	AK076196|Tubb5|22154|tubulin, beta 5	AK148978|Tubb5|22154|tubulin, beta 5	AK167808|Tubb5|22154|tubulin, beta 5	AK168271|Tubb5|22154|tubulin, beta 5	AK169123|Tubb5|22154|tubulin, beta 5	AK011263|Tubb5|22154|tubulin, beta 5	AK165249|Tubb5|22154|tubulin, beta 5	AK169210|Tubb5|22154|tubulin, beta 5	AK010960|Tubb5|22154|tubulin, beta 5	AK011765|Tubb5|22154|tubulin, beta 5	AK012350|Tubb5|22154|tubulin, beta 5	AK017806|Tubb5|22154|tubulin, beta 5	AK051164|Tubb5|22154|tubulin, beta 5	AK051393|Tubb5|22154|tubulin, beta 5	AK083327|Tubb5|22154|tubulin, beta 5	AK146567|Tubb5|22154|tubulin, beta 5	AK151215|Tubb5|22154|tubulin, beta 5	AK151670|Tubb5|22154|tubulin, beta 5	AK160225|Tubb5|22154|tubulin, beta 5	AK161575|Tubb5|22154|tubulin, beta 5	AK167691|Tubb5|22154|tubulin, beta 5	AK167779|Tubb5|22154|tubulin, beta 5	AK167926|Tubb5|22154|tubulin, beta 5	AK169295|Tubb5|22154|tubulin, beta 5	AK169606|Tubb5|22154|tubulin, beta 5	NM_011655|Tubb5|22154|tubulin, beta 5
mm9_v1_chr13_+_23844213_23844248	0.217066	POU5F1_SOX2{dimer}.p2	NM_178203|Hist1h3b|319150|histone cluster 1, H3b
mm9_v1_chr2_-_91284778_91284823	0.216288	POU5F1_SOX2{dimer}.p2	BC089006|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	AK164320|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	BC085239|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	AK045977|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	NM_175123|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene	BC032255|1110051M20Rik|228356|RIKEN cDNA 1110051M20 gene
mm9_v1_chr7_-_91100033_91100106	0.212087	POU5F1_SOX2{dimer}.p2	BC056981|9930013L23Rik|80982|RIKEN cDNA 9930013L23 gene	BC086772|9930013L23Rik|80982|RIKEN cDNA 9930013L23 gene
mm9_v1_chr17_-_34999068_34999191	0.211153	POU5F1_SOX2{dimer}.p2	AK149531|Cfb|14962|complement factor B	BC005451|Cfb|14962|complement factor B	AK098094|Cfb|14962|complement factor B	AK149573|Cfb|14962|complement factor B	M57890|Cfb|14962|complement factor B	AK151246|Cfb|14962|complement factor B
mm9_v1_chr3_-_10208575_10208582	0.208336	POU5F1_SOX2{dimer}.p2	AK003143|Fabp4|11770|fatty acid binding protein 4, adipocyte	AK088535|Fabp4|11770|fatty acid binding protein 4, adipocyte	NM_024406|Fabp4|11770|fatty acid binding protein 4, adipocyte
mm9_v1_chr4_+_106986972_106987035	0.208241	POU5F1_SOX2{dimer}.p2	AK138108|Yipf1|230584|Yip1 domain family, member 1	AK081205|Yipf1|230584|Yip1 domain family, member 1	AK157536|Yipf1|230584|Yip1 domain family, member 1	AK077502|Yipf1|230584|Yip1 domain family, member 1	BC009080|Yipf1|230584|Yip1 domain family, member 1	NM_145550|Yipf1|230584|Yip1 domain family, member 1
mm9_v1_chr3_-_89568298_89568518	0.208094	POU5F1_SOX2{dimer}.p2	AF325349|Chrnb2|11444|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)	AY574267|Chrnb2|11444|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)	AF299083|Chrnb2|11444|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)	AF145286|Chrnb2|11444|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)	BC065103|Chrnb2|11444|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
mm9_v1_chr1_+_158769044_158769153	0.20781	POU5F1_SOX2{dimer}.p2	AK142319|Angptl1|72713|angiopoietin-like 1	AK012888|Angptl1|72713|angiopoietin-like 1	BC082563|Angptl1|72713|angiopoietin-like 1	NM_028333|Angptl1|72713|angiopoietin-like 1
mm9_v1_chr5_+_150242274_150242293	0.207201	POU5F1_SOX2{dimer}.p2	AK087319|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC120819|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC144997|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC144998|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	BC144999|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	NM_029464|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	AK161244|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene	AK016369|4930588N13Rik|75860|RIKEN cDNA 4930588N13 gene
mm9_v1_chr16_+_17561977_17562125	0.19989	POU5F1_SOX2{dimer}.p2	NM_001159561|P2rx6|18440|purinergic receptor P2X, ligand-gated ion channel, 6	NM_011028|P2rx6|18440|purinergic receptor P2X, ligand-gated ion channel, 6	AK054195|P2rx6|18440|purinergic receptor P2X, ligand-gated ion channel, 6	AB010883|P2rx6|18440|purinergic receptor P2X, ligand-gated ion channel, 6	AK081308|P2rx6|18440|purinergic receptor P2X, ligand-gated ion channel, 6	BC117713|P2rx6|18440|purinergic receptor P2X, ligand-gated ion channel, 6	AK138541|P2rx6|18440|purinergic receptor P2X, ligand-gated ion channel, 6
mm9_v1_chr5_-_109027924_109027935	0.199548	POU5F1_SOX2{dimer}.p2	AK034637|Gak|231580|cyclin G associated kinase
mm9_v1_chr18_-_36614140_36614187	0.198878	POU5F1_SOX2{dimer}.p2	BC094627|Pfdn1|67199|prefoldin 1	AK002575|Pfdn1|67199|prefoldin 1	AK012575|Pfdn1|67199|prefoldin 1	NM_026027|Pfdn1|67199|prefoldin 1	AK028148|Pfdn1|67199|prefoldin 1	AK010532|Pfdn1|67199|prefoldin 1	AK003330|Pfdn1|67199|prefoldin 1	BC024693|Pfdn1|67199|prefoldin 1
mm9_v1_chr12_+_103981919_103981984	0.194073	POU5F1_SOX2{dimer}.p2	AK172131|D230037D09Rik|320351|RIKEN cDNA D230037D09 gene	AK032513|D230037D09Rik|320351|RIKEN cDNA D230037D09 gene	AK133919|D230037D09Rik|320351|RIKEN cDNA D230037D09 gene	AK052027|D230037D09Rik|320351|RIKEN cDNA D230037D09 gene	AK144149|D230037D09Rik|320351|RIKEN cDNA D230037D09 gene	NM_177140|D230037D09Rik|320351|RIKEN cDNA D230037D09 gene	BC096606|D230037D09Rik|320351|RIKEN cDNA D230037D09 gene
mm9_v1_chr10_+_111409750_111409849	0.18926	POU5F1_SOX2{dimer}.p2	NM_178610|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK012108|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK045526|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK036447|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK146926|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC089510|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK011972|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK030560|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK032472|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK041854|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK168675|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC094236|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chrX_+_57252630_57252647	0.186105	POU5F1_SOX2{dimer}.p2	AK149372|F9|14071|coagulation factor IX	NM_007979|F9|14071|coagulation factor IX	BC125617|F9|14071|coagulation factor IX	BC132393|F9|14071|coagulation factor IX
mm9_v1_chr8_+_112741857_112741896	0.181222	POU5F1_SOX2{dimer}.p2	NM_146215|Ftsjd1|234728|FtsJ methyltransferase domain containing 1	AK158368|Ftsjd1|234728|FtsJ methyltransferase domain containing 1	AK032855|Ftsjd1|234728|FtsJ methyltransferase domain containing 1	AK050315|Ftsjd1|234728|FtsJ methyltransferase domain containing 1	BC025546|Ftsjd1|234728|FtsJ methyltransferase domain containing 1
mm9_v1_chrX_-_20639111_20639168	0.178278	POU5F1_SOX2{dimer}.p2	AK155039|Zfp182|319535|zinc finger protein 182	BC063066|Zfp182|319535|zinc finger protein 182	AK045698|Zfp182|319535|zinc finger protein 182	NM_001013387|Zfp182|319535|zinc finger protein 182	NM_001111076|Zfp182|319535|zinc finger protein 182	AK043973|Zfp182|319535|zinc finger protein 182
mm9_v1_chr18_+_37880036_37880207	0.175991	POU5F1_SOX2{dimer}.p2	AK083581|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	BC138701|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	AY013806|Pcdhgb4|93701|protocadherin gamma subfamily B, 4	NM_033576|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr1_-_180267913_180267920	0.174508	POU5F1_SOX2{dimer}.p2	AK165844|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	NM_016805|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK089058|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK145682|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK159614|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK167200|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK145499|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U	AK162264|Hnrnpu|51810|heterogeneous nuclear ribonucleoprotein U
mm9_v1_chr3_+_41546539_41546585	0.171944	POU5F1_SOX2{dimer}.p2	AK138405|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	NM_001099785|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	NM_027271|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	NM_028667|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK085404|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK012700|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK039725|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK045813|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK144064|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	AK044548|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed	BC062244|D3Ertd751e|73852|DNA segment, Chr 3, ERATO Doi 751, expressed
mm9_v1_chr9_-_54509658_54509691	0.171193	POU5F1_SOX2{dimer}.p2	AB050554|Acsbg1|94180|acyl-CoA synthetase bubblegum family member 1	NM_053178|Acsbg1|94180|acyl-CoA synthetase bubblegum family member 1
mm9_v1_chr4_-_115168741_115168750	0.170982	POU5F1_SOX2{dimer}.p2	AK098088|Cyp4a14|13119|cytochrome P450, family 4, subfamily a, polypeptide 14	AK149392|Cyp4a14|13119|cytochrome P450, family 4, subfamily a, polypeptide 14	AK165452|Cyp4a14|13119|cytochrome P450, family 4, subfamily a, polypeptide 14	BC089609|Cyp4a14|13119|cytochrome P450, family 4, subfamily a, polypeptide 14	NM_007822|Cyp4a14|13119|cytochrome P450, family 4, subfamily a, polypeptide 14
mm9_v1_chr14_-_66211842_66211926	0.170975	POU5F1_SOX2{dimer}.p2	NM_028811|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	AK012072|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	AK150058|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	BC057453|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	AK088457|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)
mm9_v1_chr4_+_6321713_6321979	0.169489	POU5F1_SOX2{dimer}.p2	AK213873|Sdcbp|53378|syndecan binding protein
mm9_v1_chr8_+_70018744_70018846	0.167961	POU5F1_SOX2{dimer}.p2	AK007583|Nat2|17961|N-acetyltransferase 2 (arylamine N-acetyltransferase)	BC012972|Nat2|17961|N-acetyltransferase 2 (arylamine N-acetyltransferase)	NM_001168577|Nat2|17961|N-acetyltransferase 2 (arylamine N-acetyltransferase)	AJ251710|Nat2|17961|N-acetyltransferase 2 (arylamine N-acetyltransferase)	NM_010874|Nat2|17961|N-acetyltransferase 2 (arylamine N-acetyltransferase)
mm9_v1_chr3_+_94926272_94926508	0.167764	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr3_+_90346956_90347018	0.166588	POU5F1_SOX2{dimer}.p2	AK002991|S100a16|67860|S100 calcium binding protein A16
mm9_v1_chr16_+_3744037_3744202	0.165485	POU5F1_SOX2{dimer}.p2	NM_148924|Zfp263|74120|zinc finger protein 263	AK004765|Zfp263|74120|zinc finger protein 263	AK159455|Zfp263|74120|zinc finger protein 263	AF499776|Zfp263|74120|zinc finger protein 263	BC060162|Zfp263|74120|zinc finger protein 263
mm9_v1_chr9_+_14135884_14136028	0.162278	POU5F1_SOX2{dimer}.p2	AK033655|Sesn3|75747|sestrin 3
mm9_v1_chr11_-_17847399_17847495	0.159488	POU5F1_SOX2{dimer}.p2	AK018594|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr5_-_139060952_139060970	0.158515	POU5F1_SOX2{dimer}.p2	AB024005|Zfp68|24135|zinc finger protein 68	BC018171|Zfp68|24135|zinc finger protein 68	AK013868|Zfp68|24135|zinc finger protein 68	NM_001044747|Zfp68|24135|zinc finger protein 68	NM_001163797|Zfp68|24135|zinc finger protein 68	NM_013844|Zfp68|24135|zinc finger protein 68
mm9_v1_chr18_-_12914177_12914270	0.156255	POU5F1_SOX2{dimer}.p2	AK209493|Osbpl1a|64291|oxysterol binding protein-like 1A
mm9_v1_chr9_+_121643763_121643808	0.15415	POU5F1_SOX2{dimer}.p2	AK052484|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr12_-_4344470_4344503	0.152415	POU5F1_SOX2{dimer}.p2	U64606|Ncoa1|17977|nuclear receptor coactivator 1	BC068177|Ncoa1|17977|nuclear receptor coactivator 1
mm9_v1_chr5_-_122821971_122822010	0.150762	POU5F1_SOX2{dimer}.p2	BC061033|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	NM_026883|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene	BC057658|1500011H22Rik|68948|RIKEN cDNA 1500011H22 gene
mm9_v1_chr11_+_101594342_101594372	0.145545	POU5F1_SOX2{dimer}.p2	AK170616|Dhx8|217207|DEAH (Asp-Glu-Ala-His) box polypeptide 8
mm9_v1_chr2_-_132073389_132073439	0.139976	POU5F1_SOX2{dimer}.p2	BC080755|5730494N06Rik|70612|RIKEN cDNA 5730494N06 gene
mm9_v1_chr5_-_17341512_17341522	0.139651	POU5F1_SOX2{dimer}.p2	AK052825|Cd36|12491|CD36 antigen
mm9_v1_chrX_-_100678555_100678592	0.136244	POU5F1_SOX2{dimer}.p2	L04961|Xist|213742|inactive X specific transcripts	AK002727|Xist|213742|inactive X specific transcripts
mm9_v1_chr5_-_89105135_89105221	0.135824	POU5F1_SOX2{dimer}.p2	AK045986|Grsf1|231413|G-rich RNA sequence binding factor 1	AK044889|Grsf1|231413|G-rich RNA sequence binding factor 1	AK077782|Grsf1|231413|G-rich RNA sequence binding factor 1	NM_178700|Grsf1|231413|G-rich RNA sequence binding factor 1
mm9_v1_chr17_+_26792701_26792940	0.13563	POU5F1_SOX2{dimer}.p2	AK177289|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK191970|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	AK204835|Ergic1|67458|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
mm9_v1_chr18_+_79306780_79306919	0.135249	POU5F1_SOX2{dimer}.p2	AK048807|Gm10265|791301|predicted gene 10265
mm9_v1_chr10_-_88875526_88875657	0.134207	POU5F1_SOX2{dimer}.p2	AK171905|Gas2l3|237436|growth arrest-specific 2 like 3	AK136819|Gas2l3|237436|growth arrest-specific 2 like 3
mm9_v1_chr17_-_35294100_35294153	0.132516	POU5F1_SOX2{dimer}.p2	AK156277|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr7_+_132747000_132747050	0.131925	POU5F1_SOX2{dimer}.p2	AK171826|Il21r|60504|interleukin 21 receptor	BC057861|Il21r|60504|interleukin 21 receptor	AB049137|Il21r|60504|interleukin 21 receptor
mm9_v1_chr19_+_8911956_8912218	0.13172	POU5F1_SOX2{dimer}.p2	NM_001136064|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	AK052341|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)	BC061689|Bscl2|14705|Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
mm9_v1_chr15_+_82000246_82000509	0.131096	POU5F1_SOX2{dimer}.p2	BC023333|Srebf2|20788|sterol regulatory element binding factor 2
mm9_v1_chr1_-_174128558_174128619	0.130195	POU5F1_SOX2{dimer}.p2	BC092079|Pea15a|18611|phosphoprotein enriched in astrocytes 15A
mm9_v1_chr11_+_62062462_62062711	0.129804	POU5F1_SOX2{dimer}.p2	AK047002|Adora2b|11541|adenosine A2b receptor	NM_007413|Adora2b|11541|adenosine A2b receptor	AK080759|Adora2b|11541|adenosine A2b receptor	BC116415|Adora2b|11541|adenosine A2b receptor	BC116416|Adora2b|11541|adenosine A2b receptor	U05673|Adora2b|11541|adenosine A2b receptor	AK077289|Adora2b|11541|adenosine A2b receptor
mm9_v1_chr17_-_35164860_35164960	0.127901	POU5F1_SOX2{dimer}.p2	AK019275|Ng23|78376|Ng23 protein	BC147772|Ng23|78376|Ng23 protein	BC147780|Ng23|78376|Ng23 protein	BC172157|Ng23|78376|Ng23 protein	NM_023893|Ng23|78376|Ng23 protein
mm9_v1_chr7_-_91827857_91827907	0.125909	POU5F1_SOX2{dimer}.p2	AK002775|Zfand6|65098|zinc finger, AN1-type domain 6	NM_022985|Zfand6|65098|zinc finger, AN1-type domain 6	AK144902|Zfand6|65098|zinc finger, AN1-type domain 6	AK009403|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr9_+_38525852_38525929	0.125777	POU5F1_SOX2{dimer}.p2	NM_001145957|Vwa5a|67776|von Willebrand factor A domain containing 5A	NM_172767|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK161193|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK054497|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK136934|Vwa5a|67776|von Willebrand factor A domain containing 5A	AY366502|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK041397|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK019914|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK053665|Vwa5a|67776|von Willebrand factor A domain containing 5A	BC065153|Vwa5a|67776|von Willebrand factor A domain containing 5A
mm9_v1_chr11_-_106077657_106077682	0.124126	POU5F1_SOX2{dimer}.p2	AB040489|Ccdc47|67163|coiled-coil domain containing 47	AK078812|Ccdc47|67163|coiled-coil domain containing 47	NM_026009|Ccdc47|67163|coiled-coil domain containing 47
mm9_v1_chr13_+_49678115_49678143	0.123753	POU5F1_SOX2{dimer}.p2	AB007848|Omd|27047|osteomodulin	NM_012050|Omd|27047|osteomodulin	BC095997|Omd|27047|osteomodulin
mm9_v1_chr2_+_34627836_34627893	0.121954	POU5F1_SOX2{dimer}.p2	AJ002387|Hspa5|14828|heat shock protein 5	AK197258|Hspa5|14828|heat shock protein 5	AK215673|Hspa5|14828|heat shock protein 5
mm9_v1_chr7_+_132746962_132746990	0.121377	POU5F1_SOX2{dimer}.p2	AK172032|Il21r|60504|interleukin 21 receptor	AK137793|Il21r|60504|interleukin 21 receptor	AK150824|Il21r|60504|interleukin 21 receptor	AF279436|Il21r|60504|interleukin 21 receptor
mm9_v1_chr3_+_28596824_28596914	0.121185	POU5F1_SOX2{dimer}.p2	AK005068|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	NM_031197|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	AK165430|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	X15684|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2	BC034675|Slc2a2|20526|solute carrier family 2 (facilitated glucose transporter), member 2
mm9_v1_chr10_+_97028409_97028443	0.121092	POU5F1_SOX2{dimer}.p2	AK075737|Lum|17022|lumican	AK085240|Lum|17022|lumican	AK164774|Lum|17022|lumican
mm9_v1_chr5_+_109098124_109098124	0.120372	POU5F1_SOX2{dimer}.p2	NM_008325|Idua|15932|iduronidase, alpha-L-
mm9_v1_chr3_-_65940346_65940359	0.117773	POU5F1_SOX2{dimer}.p2	AB085189|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)	AK013398|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_028357|Veph1|72789|ventricular zone expressed PH domain homolog 1 (zebrafish)
mm9_v1_chr7_-_67285104_67285104	0.116797	POU5F1_SOX2{dimer}.p2	NM_001082962|Snrpn|20646|small nuclear ribonucleoprotein N
mm9_v1_chr6_+_116287992_116288071	0.115717	POU5F1_SOX2{dimer}.p2	AK154976|March8|71779|membrane-associated ring finger (C3HC4) 8	BC050908|March8|71779|membrane-associated ring finger (C3HC4) 8
mm9_v1_chr15_-_73015227_73015327	0.114963	POU5F1_SOX2{dimer}.p2	BC128379|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2	BC129922|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2	AB081472|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2	BC096465|Eif2c2|239528|eukaryotic translation initiation factor 2C, 2
mm9_v1_chr3_-_127256215_127256266	0.114291	POU5F1_SOX2{dimer}.p2	BC023165|Larp7|28036|La ribonucleoprotein domain family, member 7	AK015041|Larp7|28036|La ribonucleoprotein domain family, member 7	AK012772|Larp7|28036|La ribonucleoprotein domain family, member 7	AK082815|Larp7|28036|La ribonucleoprotein domain family, member 7	NM_138593|Larp7|28036|La ribonucleoprotein domain family, member 7
mm9_v1_chr5_-_136611846_136611947	0.113441	POU5F1_SOX2{dimer}.p2	AK004717|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK154352|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK051910|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK167020|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK172708|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK153976|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	BC048397|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK042370|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	AK084948|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1	NM_027891|Lrwd1|71735|leucine-rich repeats and WD repeat domain containing 1
mm9_v1_chr10_+_67498616_67498743	0.113231	POU5F1_SOX2{dimer}.p2	AK087079|Rtkn2|170799|rhotekin 2
mm9_v1_chr3_+_94497485_94497530	0.113065	POU5F1_SOX2{dimer}.p2	NM_019414|Selenbp2|20342|selenium binding protein 2	S56599|Selenbp2|20342|selenium binding protein 2	BC024106|Selenbp2|20342|selenium binding protein 2
mm9_v1_chr4_-_118846460_118846468	0.112497	POU5F1_SOX2{dimer}.p2	AK032431|Zfp691|195522|zinc finger protein 691	AK171649|Zfp691|195522|zinc finger protein 691	NM_001145935|Zfp691|195522|zinc finger protein 691	NM_183140|Zfp691|195522|zinc finger protein 691
mm9_v1_chr9_-_103190558_103190644	0.112317	POU5F1_SOX2{dimer}.p2	BC021390|1300017J02Rik|71775|RIKEN cDNA 1300017J02 gene	AK005035|1300017J02Rik|71775|RIKEN cDNA 1300017J02 gene	AK076237|1300017J02Rik|71775|RIKEN cDNA 1300017J02 gene	NM_027918|1300017J02Rik|71775|RIKEN cDNA 1300017J02 gene
mm9_v1_chr10_+_53057491_53057558	0.111255	POU5F1_SOX2{dimer}.p2	NM_001141927|Pln|18821|phospholamban	NM_023129|Pln|18821|phospholamban	BC061097|Pln|18821|phospholamban	AK002622|Pln|18821|phospholamban	AK040718|Pln|18821|phospholamban	S46792|Pln|18821|phospholamban	AK142708|Pln|18821|phospholamban	AK052199|Pln|18821|phospholamban
mm9_v1_chr2_-_94253040_94253188	0.11046	POU5F1_SOX2{dimer}.p2	AK208753|Api5|11800|apoptosis inhibitor 5
mm9_v1_chr10_-_102698899_102698955	0.110382	POU5F1_SOX2{dimer}.p2	AK158531|Lrriq1|74978|leucine-rich repeats and IQ motif containing 1	BC051400|Lrriq1|74978|leucine-rich repeats and IQ motif containing 1	AK015687|Lrriq1|74978|leucine-rich repeats and IQ motif containing 1	NM_001163559|Lrriq1|74978|leucine-rich repeats and IQ motif containing 1	NM_029134|Lrriq1|74978|leucine-rich repeats and IQ motif containing 1
mm9_v1_chr13_-_113385269_113385392	0.10943	POU5F1_SOX2{dimer}.p2	
mm9_v1_chrX_+_135751704_135751704	0.109012	POU5F1_SOX2{dimer}.p2	NM_001164631|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164632|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1	NM_001164633|Mum1l1|245631|melanoma associated antigen (mutated) 1-like 1
mm9_v1_chr11_+_85322997_85323115	0.107837	POU5F1_SOX2{dimer}.p2	AK192083|Bcas3|192197|breast carcinoma amplified sequence 3
mm9_v1_chr7_+_111367306_111367377	0.107445	POU5F1_SOX2{dimer}.p2	AK040000|Trim6|94088|tripartite motif-containing 6	NM_001013616|Trim6|94088|tripartite motif-containing 6	AK021253|Trim6|94088|tripartite motif-containing 6	AK033396|Trim6|94088|tripartite motif-containing 6	AK049238|Trim6|94088|tripartite motif-containing 6	BC138965|Trim6|94088|tripartite motif-containing 6
mm9_v1_chr12_+_110884340_110884400	0.106552	POU5F1_SOX2{dimer}.p2	AF498294|Rian|75745|RNA imprinted and accumulated in nucleus	AB063319|Rian|75745|RNA imprinted and accumulated in nucleus	AK017440|Rian|75745|RNA imprinted and accumulated in nucleus
mm9_v1_chr9_+_3404047_3404117	0.106286	POU5F1_SOX2{dimer}.p2	BC125483|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC125485|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK083386|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK045423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	NM_027545|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK014327|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK031423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC100536|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC051218|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC043480|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)
mm9_v1_chr10_-_7357774_7357973	0.105629	POU5F1_SOX2{dimer}.p2	AK179354|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1	S72473|Pcmt1|18537|protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
mm9_v1_chr16_-_30267577_30267656	0.105511	POU5F1_SOX2{dimer}.p2	BC025836|Cpn2|71756|carboxypeptidase N, polypeptide 2	AK005049|Cpn2|71756|carboxypeptidase N, polypeptide 2	NM_027904|Cpn2|71756|carboxypeptidase N, polypeptide 2
mm9_v1_chr4_-_14548903_14548926	0.105304	POU5F1_SOX2{dimer}.p2	BC026928|Slc26a7|208890|solute carrier family 26, member 7	AK054327|Slc26a7|208890|solute carrier family 26, member 7	NM_145947|Slc26a7|208890|solute carrier family 26, member 7
mm9_v1_chr11_+_62692956_62692968	0.10525	POU5F1_SOX2{dimer}.p2	AK050027|Fam18b|67510|family with sequence similarity 18, member B
mm9_v1_chr7_-_88974235_88974382	0.10461	POU5F1_SOX2{dimer}.p2	BC072618|Btbd1|83962|BTB (POZ) domain containing 1	NM_146193|Btbd1|83962|BTB (POZ) domain containing 1	BC087937|Btbd1|83962|BTB (POZ) domain containing 1	AK088345|Btbd1|83962|BTB (POZ) domain containing 1
mm9_v1_chr8_+_4613206_4613229	0.101292	POU5F1_SOX2{dimer}.p2	BC138223|Zfp958|233987|zinc finger protein 958	BC145996|Zfp958|233987|zinc finger protein 958
mm9_v1_chr3_+_132347127_132347151	0.101021	POU5F1_SOX2{dimer}.p2	BC060502|Tbck|271981|TBC1 domain containing kinase	AK052841|Tbck|271981|TBC1 domain containing kinase	AK034533|Tbck|271981|TBC1 domain containing kinase
mm9_v1_chr2_+_88798624_88798624	0.100805	POU5F1_SOX2{dimer}.p2	NM_207140|Olfr1212|258241|olfactory receptor 1212
mm9_v1_chr15_-_94408654_94408675	0.100522	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr12_+_45412878_45412942	0.0992805	POU5F1_SOX2{dimer}.p2	AK033938|Pnpla8|67452|patatin-like phospholipase domain containing 8
mm9_v1_chr19_-_28754566_28754608	0.0991188	POU5F1_SOX2{dimer}.p2	AK054020|Glis3|226075|GLIS family zinc finger 3	DQ871027|Glis3|226075|GLIS family zinc finger 3	NM_175459|Glis3|226075|GLIS family zinc finger 3
mm9_v1_chr10_-_116782524_116782604	0.0980044	POU5F1_SOX2{dimer}.p2	AK086495|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr6_+_4484651_4484672	0.097724	POU5F1_SOX2{dimer}.p2	AK159120|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr14_-_96918064_96918252	0.0971238	POU5F1_SOX2{dimer}.p2	AK031932|Klhl1|93688|kelch-like 1 (Drosophila)	AF252281|Klhl1|93688|kelch-like 1 (Drosophila)	BC094584|Klhl1|93688|kelch-like 1 (Drosophila)	NM_053105|Klhl1|93688|kelch-like 1 (Drosophila)
mm9_v1_chr14_-_67627598_67627723	0.0968336	POU5F1_SOX2{dimer}.p2	AK220143|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC049081|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK139950|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK004667|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	BC085237|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK018668|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK155040|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AY057069|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK013467|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK007920|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AF067395|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK168482|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	AK169391|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like	NM_009761|Bnip3l|12177|BCL2/adenovirus E1B interacting protein 3-like
mm9_v1_chr2_-_34956162_34956206	0.0959605	POU5F1_SOX2{dimer}.p2	BC019541|AI182371|98870|expressed sequence AI182371	BC037995|AI182371|98870|expressed sequence AI182371	AK050413|AI182371|98870|expressed sequence AI182371	BC115979|AI182371|98870|expressed sequence AI182371	BC115986|AI182371|98870|expressed sequence AI182371	NM_178885|AI182371|98870|expressed sequence AI182371	BC094504|AI182371|98870|expressed sequence AI182371	AK050126|AI182371|98870|expressed sequence AI182371
mm9_v1_chr18_+_80315134_80315153	0.0958853	POU5F1_SOX2{dimer}.p2	AK010699|Pard6g|93737|par-6 partitioning defective 6 homolog gamma (C. elegans)
mm9_v1_chr1_+_166081951_166082088	0.0954931	POU5F1_SOX2{dimer}.p2	AK137521|F5|14067|coagulation factor V	AK139240|F5|14067|coagulation factor V	AK137537|F5|14067|coagulation factor V	NM_007976|F5|14067|coagulation factor V	U52925|F5|14067|coagulation factor V
mm9_v1_chr2_-_6466116_6466118	0.094114	POU5F1_SOX2{dimer}.p2	AK134815|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr4_-_49519333_49519379	0.0939821	POU5F1_SOX2{dimer}.p2	U95215|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase	BC012683|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase	AK017923|Baat|12012|bile acid-Coenzyme A: amino acid N-acyltransferase
mm9_v1_chr18_+_35966147_35966251	0.0933268	POU5F1_SOX2{dimer}.p2	AK075844|Ube2d2|56550|ubiquitin-conjugating enzyme E2D 2
mm9_v1_chr2_+_35154311_35154429	0.0930882	POU5F1_SOX2{dimer}.p2	AK188287|Gsn|227753|gelsolin	AK188608|Gsn|227753|gelsolin
mm9_v1_chr11_+_82878590_82878700	0.0903825	POU5F1_SOX2{dimer}.p2	AF099973|Slfn2|20556|schlafen 2	NM_011408|Slfn2|20556|schlafen 2	BC138749|Slfn2|20556|schlafen 2	BC138750|Slfn2|20556|schlafen 2
mm9_v1_chr10_+_97028456_97028463	0.090279	POU5F1_SOX2{dimer}.p2	BC005550|Lum|17022|lumican	S79461|Lum|17022|lumican
mm9_v1_chr2_-_163462584_163462669	0.0902353	POU5F1_SOX2{dimer}.p2	AK128955|Serinc3|26943|serine incorporator 3
mm9_v1_chr9_-_21940154_21940189	0.0901267	POU5F1_SOX2{dimer}.p2	AK010865|Acp5|11433|acid phosphatase 5, tartrate resistant	AK011915|Acp5|11433|acid phosphatase 5, tartrate resistant	NM_001102405|Acp5|11433|acid phosphatase 5, tartrate resistant
mm9_v1_chr9_+_85739048_85739158	0.0898069	POU5F1_SOX2{dimer}.p2	AK050794|Tpbg|21983|trophoblast glycoprotein
mm9_v1_chr12_-_114167705_114167755	0.0890179	POU5F1_SOX2{dimer}.p2	AF038572|Jag2|16450|jagged 2	NM_010588|Jag2|16450|jagged 2
mm9_v1_chr2_+_155207542_155207579	0.0886321	POU5F1_SOX2{dimer}.p2	AK170132|Trp53inp2|68728|transformation related protein 53 inducible nuclear protein 2
mm9_v1_chr19_-_44103644_44103736	0.0876931	POU5F1_SOX2{dimer}.p2	BC024068|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC034834|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC022141|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC025819|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	BC026766|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	AK050436|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	AK149451|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	NM_001001446|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44	NM_001167905|Cyp2c44|226143|cytochrome P450, family 2, subfamily c, polypeptide 44
mm9_v1_chr12_-_52849709_52849723	0.0875588	POU5F1_SOX2{dimer}.p2	AK077185|Hectd1|207304|HECT domain containing 1
mm9_v1_chr8_-_94879643_94879671	0.0870818	POU5F1_SOX2{dimer}.p2	AK181465|4933436C20Rik|71296|RIKEN cDNA 4933436C20 gene
mm9_v1_chr7_-_87532756_87532844	0.0866257	POU5F1_SOX2{dimer}.p2	BC100306|Fes|14159|feline sarcoma oncogene	AK170418|Fes|14159|feline sarcoma oncogene	AK143639|Fes|14159|feline sarcoma oncogene	AK004587|Fes|14159|feline sarcoma oncogene	AK155861|Fes|14159|feline sarcoma oncogene	NM_010194|Fes|14159|feline sarcoma oncogene	BC038130|Fes|14159|feline sarcoma oncogene
mm9_v1_chr3_-_103546233_103546253	0.0859072	POU5F1_SOX2{dimer}.p2	AK031871|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr4_+_57907032_57907040	0.0841492	POU5F1_SOX2{dimer}.p2	AK086796|Akap2|11641|A kinase (PRKA) anchor protein 2
mm9_v1_chr4_+_129168433_129168515	0.0835455	POU5F1_SOX2{dimer}.p2	NM_001085491|1700125D06Rik|68233|RIKEN cDNA 1700125D06 gene	AK018987|1700125D06Rik|68233|RIKEN cDNA 1700125D06 gene	AK006760|1700125D06Rik|68233|RIKEN cDNA 1700125D06 gene	AK018964|1700125D06Rik|68233|RIKEN cDNA 1700125D06 gene	AK018907|1700125D06Rik|68233|RIKEN cDNA 1700125D06 gene	BC048660|1700125D06Rik|68233|RIKEN cDNA 1700125D06 gene
mm9_v1_chr4_-_101028734_101028813	0.0828872	POU5F1_SOX2{dimer}.p2	AK021368|E130102H24Rik|77866|RIKEN cDNA E130102H24 gene
mm9_v1_chr1_+_74421706_74421882	0.0821736	POU5F1_SOX2{dimer}.p2	AK090303|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	NM_013612|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	AK171393|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	AK144237|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	AK171343|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	L13732|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	X75355|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	BC109137|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1	BC109138|Slc11a1|18173|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
mm9_v1_chr11_+_106078232_106078424	0.0804222	POU5F1_SOX2{dimer}.p2	AK049311|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	NM_028074|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK169816|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK021013|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK171730|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	AK134182|Ddx42|72047|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
mm9_v1_chr13_-_65214222_65214309	0.0786251	POU5F1_SOX2{dimer}.p2	BC033469|Hiatl1|66631|hippocampus abundant transcript-like 1	AK090174|Hiatl1|66631|hippocampus abundant transcript-like 1	AK146596|Hiatl1|66631|hippocampus abundant transcript-like 1	NM_001083901|Hiatl1|66631|hippocampus abundant transcript-like 1	NM_133680|Hiatl1|66631|hippocampus abundant transcript-like 1
mm9_v1_chr2_+_166849936_166849995	0.0780604	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr8_-_8666771_8666782	0.0773774	POU5F1_SOX2{dimer}.p2	AK038412|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr5_+_104494153_104494232	0.0770027	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr11_-_90252208_90252214	0.0768426	POU5F1_SOX2{dimer}.p2	BC058705|Hlf|217082|hepatic leukemia factor
mm9_v1_chr13_+_51245730_51245816	0.0767403	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr7_+_126761293_126761347	0.0763465	POU5F1_SOX2{dimer}.p2	AK149586|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1	AK149550|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1	BC016414|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1	AB059428|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1	NM_054094|Acsm1|117147|acyl-CoA synthetase medium-chain family member 1
mm9_v1_chr8_-_75091078_75091201	0.0761192	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr18_-_42900793_42900846	0.0753122	POU5F1_SOX2{dimer}.p2	AF512670|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm9_v1_chr3_+_116265890_116265995	0.0746072	POU5F1_SOX2{dimer}.p2	AK035072|Lrrc39|109245|leucine rich repeat containing 39	NM_027321|Lrrc39|109245|leucine rich repeat containing 39	NM_175413|Lrrc39|109245|leucine rich repeat containing 39	AK039277|Lrrc39|109245|leucine rich repeat containing 39	AK079125|Lrrc39|109245|leucine rich repeat containing 39	AK008119|Lrrc39|109245|leucine rich repeat containing 39	AK052159|Lrrc39|109245|leucine rich repeat containing 39	BC119529|Lrrc39|109245|leucine rich repeat containing 39	BC119530|Lrrc39|109245|leucine rich repeat containing 39	AK046671|Lrrc39|109245|leucine rich repeat containing 39
mm9_v1_chr7_+_50927384_50927400	0.0743662	POU5F1_SOX2{dimer}.p2	AK155284|Ctu1|233189|cytosolic thiouridylase subunit 1 homolog (S. pombe)	AK160967|Ctu1|233189|cytosolic thiouridylase subunit 1 homolog (S. pombe)	BC005752|Ctu1|233189|cytosolic thiouridylase subunit 1 homolog (S. pombe)	NM_145582|Ctu1|233189|cytosolic thiouridylase subunit 1 homolog (S. pombe)
mm9_v1_chr15_+_12808445_12808493	0.0741258	POU5F1_SOX2{dimer}.p2	BC040801|Drosha|14000|drosha, ribonuclease type III
mm9_v1_chr5_+_119214502_119214629	0.0731889	POU5F1_SOX2{dimer}.p2	AK018557|Med13l|76199|mediator complex subunit 13-like
mm9_v1_chr3_+_136460712_136460798	0.0725454	POU5F1_SOX2{dimer}.p2	AK209023|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr7_+_97535516_97535523	0.071671	POU5F1_SOX2{dimer}.p2	AB057756|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr15_-_75900663_75900763	0.0688071	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr14_+_79797578_79797662	0.0683548	POU5F1_SOX2{dimer}.p2	AK077749|Mtrf1|211253|mitochondrial translational release factor 1	NM_145960|Mtrf1|211253|mitochondrial translational release factor 1	BC028898|Mtrf1|211253|mitochondrial translational release factor 1
mm9_v1_chr6_-_122287014_122287032	0.0676593	POU5F1_SOX2{dimer}.p2	U63386|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_001042623|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_007905|Phc1|13619|polyhomeotic-like 1 (Drosophila)
mm9_v1_chr3_+_132772586_132772695	0.0676277	POU5F1_SOX2{dimer}.p2	AK015941|Ints12|71793|integrator complex subunit 12
mm9_v1_chr7_-_26506741_26506878	0.0675433	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr1_+_51346086_51346100	0.0652992	POU5F1_SOX2{dimer}.p2	AK084096|Sdpr|20324|serum deprivation response
mm9_v1_chr13_+_113657736_113657889	0.065196	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr3_+_51299153_51299205	0.0651857	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr13_-_76236014_76236047	0.0648321	POU5F1_SOX2{dimer}.p2	AK035464|Arsk|77041|arylsulfatase K
mm9_v1_chr2_+_131763454_131763725	0.0633122	POU5F1_SOX2{dimer}.p2	AK215651|Prnp|19122|prion protein	AK205534|Prnp|19122|prion protein	AK213884|Prnp|19122|prion protein	AK206219|Prnp|19122|prion protein
mm9_v1_chr10_-_8665041_8665100	0.0630565	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr19_+_10271150_10271263	0.0612028	POU5F1_SOX2{dimer}.p2	AK191356|Fads1|76267|fatty acid desaturase 1	AK199659|Fads1|76267|fatty acid desaturase 1
mm9_v1_chrX_+_72759635_72759692	0.0600768	POU5F1_SOX2{dimer}.p2	NM_011692|Vbp1|22327|von Hippel-Lindau binding protein 1	AK167742|Vbp1|22327|von Hippel-Lindau binding protein 1	AK077923|Vbp1|22327|von Hippel-Lindau binding protein 1	AK002282|Vbp1|22327|von Hippel-Lindau binding protein 1	AK008847|Vbp1|22327|von Hippel-Lindau binding protein 1	AK051431|Vbp1|22327|von Hippel-Lindau binding protein 1	AK151527|Vbp1|22327|von Hippel-Lindau binding protein 1	AK159284|Vbp1|22327|von Hippel-Lindau binding protein 1	AK167064|Vbp1|22327|von Hippel-Lindau binding protein 1	AK169185|Vbp1|22327|von Hippel-Lindau binding protein 1	AK153069|Vbp1|22327|von Hippel-Lindau binding protein 1	U96760|Vbp1|22327|von Hippel-Lindau binding protein 1	BC132169|Vbp1|22327|von Hippel-Lindau binding protein 1	BC132171|Vbp1|22327|von Hippel-Lindau binding protein 1
mm9_v1_chr14_+_31699648_31699721	0.0590806	POU5F1_SOX2{dimer}.p2	NM_001159299|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	NM_018746|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AK004862|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AK004893|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AK050016|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AK050270|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	AF023919|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	BC016500|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	BC021459|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	BC092258|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4	BC094457|Itih4|16427|inter alpha-trypsin inhibitor, heavy chain 4
mm9_v1_chrX_+_53862956_53863040	0.0589804	POU5F1_SOX2{dimer}.p2	NM_172780|Slc9a6|236794|solute carrier family 9 (sodium/hydrogen exchanger), member 6	AK032326|Slc9a6|236794|solute carrier family 9 (sodium/hydrogen exchanger), member 6	BC130221|Slc9a6|236794|solute carrier family 9 (sodium/hydrogen exchanger), member 6	AK122232|Slc9a6|236794|solute carrier family 9 (sodium/hydrogen exchanger), member 6
mm9_v1_chr12_-_42212337_42212337	0.0575764	POU5F1_SOX2{dimer}.p2	BC069041|Lrrn3|16981|leucine rich repeat protein 3, neuronal	NM_010733|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chr19_+_6084982_6085059	0.057423	POU5F1_SOX2{dimer}.p2	AK016305|Cdca5|67849|cell division cycle associated 5
mm9_v1_chr15_+_102044730_102044866	0.0556623	POU5F1_SOX2{dimer}.p2	AK004098|Zfp740|68744|zinc finger protein 740
mm9_v1_chr3_+_68376289_68376313	0.0551127	POU5F1_SOX2{dimer}.p2	NM_013928|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr5_-_77640458_77640477	0.0546306	POU5F1_SOX2{dimer}.p2	BC087876|Spink2|69982|serine peptidase inhibitor, Kazal type 2	BC048619|Spink2|69982|serine peptidase inhibitor, Kazal type 2	AK005709|Spink2|69982|serine peptidase inhibitor, Kazal type 2	NM_183284|Spink2|69982|serine peptidase inhibitor, Kazal type 2
mm9_v1_chr3_-_137794277_137794364	0.0543202	POU5F1_SOX2{dimer}.p2	L47970|Mttp|17777|microsomal triglyceride transfer protein	BC012686|Mttp|17777|microsomal triglyceride transfer protein	AK146553|Mttp|17777|microsomal triglyceride transfer protein	NM_008642|Mttp|17777|microsomal triglyceride transfer protein
mm9_v1_chr13_+_67880629_67880739	0.0542907	POU5F1_SOX2{dimer}.p2	NM_028402|Zfp493|72958|zinc finger protein 493	AK013687|Zfp493|72958|zinc finger protein 493	AK140336|Zfp493|72958|zinc finger protein 493
mm9_v1_chrX_-_7248403_7248534	0.0539263	POU5F1_SOX2{dimer}.p2	BC119088|Plp2|18824|proteolipid protein 2	BC119090|Plp2|18824|proteolipid protein 2	NM_019755|Plp2|18824|proteolipid protein 2	AB031292|Plp2|18824|proteolipid protein 2	BC092095|Plp2|18824|proteolipid protein 2	BC083078|Plp2|18824|proteolipid protein 2	AK011282|Plp2|18824|proteolipid protein 2	AK003522|Plp2|18824|proteolipid protein 2	AK154228|Plp2|18824|proteolipid protein 2	AK012816|Plp2|18824|proteolipid protein 2
mm9_v1_chr2_+_110561733_110561771	0.0538433	POU5F1_SOX2{dimer}.p2	AY198336|Muc15|269328|mucin 15	AK052840|Muc15|269328|mucin 15	AK142590|Muc15|269328|mucin 15	NM_172979|Muc15|269328|mucin 15	BC094506|Muc15|269328|mucin 15	BC116796|Muc15|269328|mucin 15	BC119176|Muc15|269328|mucin 15
mm9_v1_chr4_+_95246111_95246193	0.0535422	POU5F1_SOX2{dimer}.p2	NM_029347|Fggy|75578|FGGY carbohydrate kinase domain containing	AK085534|Fggy|75578|FGGY carbohydrate kinase domain containing	BC031708|Fggy|75578|FGGY carbohydrate kinase domain containing
mm9_v1_chr6_-_71561919_71561988	0.0522996	POU5F1_SOX2{dimer}.p2	AK049243|Kdm3a|104263|lysine (K)-specific demethylase 3A
mm9_v1_chr14_-_103498719_103498784	0.0522612	POU5F1_SOX2{dimer}.p2	AK142007|Fbxl3|50789|F-box and leucine-rich repeat protein 3	NM_015822|Fbxl3|50789|F-box and leucine-rich repeat protein 3	AK080863|Fbxl3|50789|F-box and leucine-rich repeat protein 3	AK080802|Fbxl3|50789|F-box and leucine-rich repeat protein 3
mm9_v1_chr19_+_11592938_11593140	0.0519271	POU5F1_SOX2{dimer}.p2	AF237909|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	NM_027209|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK172345|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	BC027425|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK075671|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B	AK007613|Ms4a6b|69774|membrane-spanning 4-domains, subfamily A, member 6B
mm9_v1_chr8_-_63433528_63433596	0.0512449	POU5F1_SOX2{dimer}.p2	BC057133|Clcn3|12725|chloride channel 3	NM_173876|Clcn3|12725|chloride channel 3
mm9_v1_chr5_-_149320857_149320933	0.0497081	POU5F1_SOX2{dimer}.p2	AK197397|Ubl3|24109|ubiquitin-like 3	AK204771|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr7_+_50817739_50817739	0.0476537	POU5F1_SOX2{dimer}.p2	AK155078|Zfp658|210104|zinc finger protein 658	NM_001008549|Zfp658|210104|zinc finger protein 658
mm9_v1_chr4_+_130225132_130225155	0.0474757	POU5F1_SOX2{dimer}.p2	AK154059|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr6_+_57652594_57652646	0.0474412	POU5F1_SOX2{dimer}.p2	BC016072|Lancl2|71835|LanC (bacterial lantibiotic synthetase component C)-like 2	AB035967|Lancl2|71835|LanC (bacterial lantibiotic synthetase component C)-like 2
mm9_v1_chr2_+_87642546_87642547	0.0460952	POU5F1_SOX2{dimer}.p2	BC140120|Olfr1143|258290|olfactory receptor 1143	BC140161|Olfr1143|258290|olfactory receptor 1143	BC140202|Olfr1143|258290|olfactory receptor 1143	NM_146293|Olfr1143|258290|olfactory receptor 1143
mm9_v1_chr3_+_55265811_55265928	0.045753	POU5F1_SOX2{dimer}.p2	AF155821|Dclk1|13175|doublecortin-like kinase 1	AK032424|Dclk1|13175|doublecortin-like kinase 1	AK081200|Dclk1|13175|doublecortin-like kinase 1	AB073969|Dclk1|13175|doublecortin-like kinase 1	AK047716|Dclk1|13175|doublecortin-like kinase 1	AY968047|Dclk1|13175|doublecortin-like kinase 1	AY968048|Dclk1|13175|doublecortin-like kinase 1
mm9_v1_chr3_+_154259658_154259674	0.044389	POU5F1_SOX2{dimer}.p2	AK133820|Cryz|12972|crystallin, zeta
mm9_v1_chr15_+_65703468_65703625	0.0441448	POU5F1_SOX2{dimer}.p2	AK039483|Efr3a|76740|EFR3 homolog A (S. cerevisiae)
mm9_v1_chr15_+_59162396_59162483	0.0434116	POU5F1_SOX2{dimer}.p2	AK190780|Sqle|20775|squalene epoxidase	AK217980|Sqle|20775|squalene epoxidase
mm9_v1_chr7_+_104991475_104991479	0.0432406	POU5F1_SOX2{dimer}.p2	AF082077|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1
mm9_v1_chr11_+_70338856_70338858	0.0428163	POU5F1_SOX2{dimer}.p2	NM_008946|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6
mm9_v1_chr2_+_130732201_130732231	0.0423991	POU5F1_SOX2{dimer}.p2	AK155069|Atrn|11990|attractin	AF116897|Atrn|11990|attractin	NM_009730|Atrn|11990|attractin
mm9_v1_chr4_-_43044241_43044275	0.0407364	POU5F1_SOX2{dimer}.p2	AK002793|Stoml2|66592|stomatin (Epb7.2)-like 2	BC069941|Stoml2|66592|stomatin (Epb7.2)-like 2	BC003425|Stoml2|66592|stomatin (Epb7.2)-like 2	NM_023231|Stoml2|66592|stomatin (Epb7.2)-like 2	AF323178|Stoml2|66592|stomatin (Epb7.2)-like 2
mm9_v1_chr19_+_30020236_30020283	0.0402879	POU5F1_SOX2{dimer}.p2	AK075849|Il33|77125|interleukin 33	NM_001164724|Il33|77125|interleukin 33
mm9_v1_chr18_+_35750406_35750586	0.0398264	POU5F1_SOX2{dimer}.p2	AK139050|Matr3|17184|matrin 3	AK084822|Matr3|17184|matrin 3	AK148059|Matr3|17184|matrin 3
mm9_v1_chr6_-_54922563_54922606	0.0394383	POU5F1_SOX2{dimer}.p2	NM_172729|Nod1|107607|nucleotide-binding oligomerization domain containing 1	AK137585|Nod1|107607|nucleotide-binding oligomerization domain containing 1
mm9_v1_chr2_-_35973217_35973333	0.0388253	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr19_+_13439119_13439119	0.0381996	POU5F1_SOX2{dimer}.p2	NM_146691|Olfr1467|258686|olfactory receptor 1467
mm9_v1_chr2_-_35972131_35972337	0.0380529	POU5F1_SOX2{dimer}.p2	AK220096|Rbm18|67889|RNA binding motif protein 18
mm9_v1_chr9_-_42062436_42062522	0.0374828	POU5F1_SOX2{dimer}.p2	AK050439|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)	AK165139|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)
mm9_v1_chr18_+_78016353_78016381	0.0367833	POU5F1_SOX2{dimer}.p2	AK164193|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr2_+_129442079_129442192	0.0365467	POU5F1_SOX2{dimer}.p2	AK195466|Sirpa|19261|signal-regulatory protein alpha
mm9_v1_chr3_-_127256114_127256139	0.036279	POU5F1_SOX2{dimer}.p2	BC020127|Larp7|28036|La ribonucleoprotein domain family, member 7
mm9_v1_chr2_-_30823346_30823454	0.0358842	POU5F1_SOX2{dimer}.p2	AK082936|Tor1a|30931|torsin family 1, member A (torsin A)	AK079728|Tor1a|30931|torsin family 1, member A (torsin A)	AJ298841|Tor1a|30931|torsin family 1, member A (torsin A)	AK038891|Tor1a|30931|torsin family 1, member A (torsin A)	AK160361|Tor1a|30931|torsin family 1, member A (torsin A)	BC017683|Tor1a|30931|torsin family 1, member A (torsin A)	NM_144884|Tor1a|30931|torsin family 1, member A (torsin A)
mm9_v1_chr8_+_71626352_71626466	0.0356883	POU5F1_SOX2{dimer}.p2	AK187885|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2	AK196120|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2	AK205248|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2	AK207339|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2	AK207413|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2	AK209086|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2	AK210829|Atp6v1b2|11966|ATPase, H+ transporting, lysosomal V1 subunit B2
mm9_v1_chr3_-_36512237_36512327	0.0355952	POU5F1_SOX2{dimer}.p2	AK132661|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	BC031505|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK050291|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AF521645|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	AK018389|Bbs7|71492|Bardet-Biedl syndrome 7 (human)	NM_027810|Bbs7|71492|Bardet-Biedl syndrome 7 (human)
mm9_v1_chr12_+_8349099_8349214	0.0353277	POU5F1_SOX2{dimer}.p2	AK179779|Hs1bp3|58240|HCLS1 binding protein 3	AK207587|Hs1bp3|58240|HCLS1 binding protein 3	AK211752|Hs1bp3|58240|HCLS1 binding protein 3	AK206139|Hs1bp3|58240|HCLS1 binding protein 3
mm9_v1_chr19_+_6085096_6085130	0.0352353	POU5F1_SOX2{dimer}.p2	NM_026410|Cdca5|67849|cell division cycle associated 5	AK011701|Cdca5|67849|cell division cycle associated 5	BC052904|Cdca5|67849|cell division cycle associated 5	AK010540|Cdca5|67849|cell division cycle associated 5
mm9_v1_chr13_+_24904944_24904959	0.0350532	POU5F1_SOX2{dimer}.p2	AK088171|BC005537|79555|cDNA sequence BC005537
mm9_v1_chr7_-_29959614_29959760	0.0349945	POU5F1_SOX2{dimer}.p2	AK194690|Psmd8|57296|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
mm9_v1_chr17_-_59152686_59152744	0.0349852	POU5F1_SOX2{dimer}.p2	BC057657|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12	AK147867|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12	AK083846|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12	AK002641|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12	NM_026497|Nudt12|67993|nudix (nucleoside diphosphate linked moiety X)-type motif 12
mm9_v1_chr15_-_37909575_37909591	0.0344818	POU5F1_SOX2{dimer}.p2	BC064751|Ubr5|70790|ubiquitin protein ligase E3 component n-recognin 5
mm9_v1_chr16_+_48816968_48817099	0.0340839	POU5F1_SOX2{dimer}.p2	AF290871|Retnlb|57263|resistin like beta	NM_023881|Retnlb|57263|resistin like beta	AK020240|Retnlb|57263|resistin like beta	AF323083|Retnlb|57263|resistin like beta	BC022650|Retnlb|57263|resistin like beta
mm9_v1_chr14_-_51405130_51405204	0.0335791	POU5F1_SOX2{dimer}.p2	BC003272|Ttc5|219022|tetratricopeptide repeat domain 5	BC025610|Ttc5|219022|tetratricopeptide repeat domain 5	AK077874|Ttc5|219022|tetratricopeptide repeat domain 5	BC092074|Ttc5|219022|tetratricopeptide repeat domain 5	AK081214|Ttc5|219022|tetratricopeptide repeat domain 5	AK161279|Ttc5|219022|tetratricopeptide repeat domain 5	AK157777|Ttc5|219022|tetratricopeptide repeat domain 5	AK133953|Ttc5|219022|tetratricopeptide repeat domain 5	BC069946|Ttc5|219022|tetratricopeptide repeat domain 5	AK044781|Ttc5|219022|tetratricopeptide repeat domain 5	NM_001080949|Ttc5|219022|tetratricopeptide repeat domain 5	NM_177625|Ttc5|219022|tetratricopeptide repeat domain 5
mm9_v1_chr19_-_32182638_32182709	0.0331585	POU5F1_SOX2{dimer}.p2	AB037111|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK080951|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK041937|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK047692|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK046540|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK166100|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK034493|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr3_-_142456600_142456910	0.0323443	POU5F1_SOX2{dimer}.p2	AK140746|Pkn2|109333|protein kinase N2	AK084887|Pkn2|109333|protein kinase N2	AK082921|Pkn2|109333|protein kinase N2
mm9_v1_chr13_-_93253967_93253985	0.0317575	POU5F1_SOX2{dimer}.p2	AK015100|Fam151b|73942|family with sequence similarity 151, member B	AK162422|Fam151b|73942|family with sequence similarity 151, member B	NM_001163627|Fam151b|73942|family with sequence similarity 151, member B
mm9_v1_chr9_-_115152895_115153139	0.0316532	POU5F1_SOX2{dimer}.p2	AK213927|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm9_v1_chr14_+_61351770_61351875	0.0313645	POU5F1_SOX2{dimer}.p2	AK151394|Spata13|219140|spermatogenesis associated 13
mm9_v1_chr10_+_74674793_74674887	0.0313352	POU5F1_SOX2{dimer}.p2	AK035500|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AY884297|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	NM_153406|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AK052716|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like	AK172502|Specc1l|74392|sperm antigen with calponin homology and coiled-coil domains 1-like
mm9_v1_chr2_-_131846852_131846920	0.031217	POU5F1_SOX2{dimer}.p2	AK037601|Rassf2|215653|Ras association (RalGDS/AF-6) domain family member 2
mm9_v1_chr9_-_116084547_116084563	0.0303441	POU5F1_SOX2{dimer}.p2	AK043619|Tgfbr2|21813|transforming growth factor, beta receptor II
mm9_v1_chr17_+_71533016_71533072	0.0301955	POU5F1_SOX2{dimer}.p2	AK086834|Lpin2|64898|lipin 2
mm9_v1_chr16_+_17018484_17018507	0.0294477	POU5F1_SOX2{dimer}.p2	AK193161|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr8_+_74662546_74662561	0.0286494	POU5F1_SOX2{dimer}.p2	AK215613|Tpm4|326618|tropomyosin 4
mm9_v1_chr15_+_75799550_75799614	0.0280765	POU5F1_SOX2{dimer}.p2	AK137962|Zfp707|69020|zinc finger protein 707	NM_001081065|Zfp707|69020|zinc finger protein 707
mm9_v1_chr16_+_17045125_17045167	0.0276689	POU5F1_SOX2{dimer}.p2	AK163692|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chrX_-_22797942_22797952	0.0270901	POU5F1_SOX2{dimer}.p2	AK013399|Klhl13|67455|kelch-like 13 (Drosophila)
mm9_v1_chr9_-_96978102_96978110	0.0269551	POU5F1_SOX2{dimer}.p2	AK087750|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chr2_+_34628721_34628809	0.026933	POU5F1_SOX2{dimer}.p2	AK219322|Hspa5|14828|heat shock protein 5
mm9_v1_chr6_+_56935288_56935335	0.0268227	POU5F1_SOX2{dimer}.p2	BC138068|Vmn1r5|171192|vomeronasal 1 receptor 5	BC138069|Vmn1r5|171192|vomeronasal 1 receptor 5	NM_134174|Vmn1r5|171192|vomeronasal 1 receptor 5
mm9_v1_chr11_+_43534658_43534687	0.0262744	POU5F1_SOX2{dimer}.p2	AK086604|Pwwp2a|70802|PWWP domain containing 2A	AK039984|Pwwp2a|70802|PWWP domain containing 2A
mm9_v1_chr3_+_94736993_94737043	0.0259741	POU5F1_SOX2{dimer}.p2	BC011202|Selenbp1|20341|selenium binding protein 1	NM_009150|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr6_+_87040212_87040221	0.0259491	POU5F1_SOX2{dimer}.p2	AK013141|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr2_-_120346171_120346284	0.0256257	POU5F1_SOX2{dimer}.p2	AF060245|Zfp106|20402|zinc finger protein 106	AK029313|Zfp106|20402|zinc finger protein 106
mm9_v1_chr10_+_7512691_7512745	0.0255465	POU5F1_SOX2{dimer}.p2	AK017370|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	NM_026141|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK014453|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK011443|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK013377|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK014406|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK049634|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK164127|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK167258|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK012371|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	AK167168|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4	BC079912|Ppil4|67418|peptidylprolyl isomerase (cyclophilin)-like 4
mm9_v1_chr16_+_3744231_3744292	0.0249445	POU5F1_SOX2{dimer}.p2	BC011505|Zfp263|74120|zinc finger protein 263	BC056222|Zfp263|74120|zinc finger protein 263
mm9_v1_chr15_-_58614642_58614788	0.0248459	POU5F1_SOX2{dimer}.p2	AK011623|Tmem65|74868|transmembrane protein 65
mm9_v1_chr7_-_96487105_96487235	0.0248167	POU5F1_SOX2{dimer}.p2	AK028401|Tmem135|72759|transmembrane protein 135	AY040841|Tmem135|72759|transmembrane protein 135	BC050931|Tmem135|72759|transmembrane protein 135	AK153175|Tmem135|72759|transmembrane protein 135
mm9_v1_chr11_-_54533036_54533041	0.0247887	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr17_+_21625972_21626045	0.0240603	POU5F1_SOX2{dimer}.p2	BC020362|Zfp53|24132|zinc finger protein 53
mm9_v1_chr1_-_172040621_172040689	0.0227716	POU5F1_SOX2{dimer}.p2	BC138826|Ddr2|18214|discoidin domain receptor family, member 2	BC138827|Ddr2|18214|discoidin domain receptor family, member 2	X76505|Ddr2|18214|discoidin domain receptor family, member 2
mm9_v1_chr6_-_126485370_126485572	0.0226132	POU5F1_SOX2{dimer}.p2	BC021787|Kcna5|16493|potassium voltage-gated channel, shaker-related subfamily, member 5	AK146843|Kcna5|16493|potassium voltage-gated channel, shaker-related subfamily, member 5	AF108659|Kcna5|16493|potassium voltage-gated channel, shaker-related subfamily, member 5	L22218|Kcna5|16493|potassium voltage-gated channel, shaker-related subfamily, member 5	NM_145983|Kcna5|16493|potassium voltage-gated channel, shaker-related subfamily, member 5
mm9_v1_chr15_-_66663390_66663390	0.0223375	POU5F1_SOX2{dimer}.p2	AK036167|Sla|20491|src-like adaptor	NM_001029841|Sla|20491|src-like adaptor
mm9_v1_chr10_+_40657980_40658124	0.0219543	POU5F1_SOX2{dimer}.p2	AK080786|Wasf1|83767|WASP family 1
mm9_v1_chr1_+_160292470_160292548	0.0218701	POU5F1_SOX2{dimer}.p2	AK164117|Astn1|11899|astrotactin 1	NM_007495|Astn1|11899|astrotactin 1	BC094666|Astn1|11899|astrotactin 1
mm9_v1_chr17_+_21625914_21625965	0.0212707	POU5F1_SOX2{dimer}.p2	BC023798|Zfp53|24132|zinc finger protein 53	BC046328|Zfp53|24132|zinc finger protein 53	AK148857|Zfp53|24132|zinc finger protein 53	NM_013843|Zfp53|24132|zinc finger protein 53	AK147827|Zfp53|24132|zinc finger protein 53	AK030965|Zfp53|24132|zinc finger protein 53
mm9_v1_chr5_+_104868321_104868417	0.020973	POU5F1_SOX2{dimer}.p2	BC014284|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr7_+_111054855_111054855	0.0202852	POU5F1_SOX2{dimer}.p2	BC137766|Olfr65|18365|olfactory receptor 65	NM_013616|Olfr65|18365|olfactory receptor 65
mm9_v1_chr3_+_95238292_95238339	0.0192218	POU5F1_SOX2{dimer}.p2	AK040475|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	NM_001037737|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	NM_009709|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK028546|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK153355|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK152473|Arnt|11863|aryl hydrocarbon receptor nuclear translocator
mm9_v1_chr12_+_73542852_73542935	0.0191216	POU5F1_SOX2{dimer}.p2	AK029802|Lrrc9|78257|leucine rich repeat containing 9	NM_001142728|Lrrc9|78257|leucine rich repeat containing 9	NM_030070|Lrrc9|78257|leucine rich repeat containing 9	AK019545|Lrrc9|78257|leucine rich repeat containing 9	AK015292|Lrrc9|78257|leucine rich repeat containing 9
mm9_v1_chr11_-_106642684_106642809	0.0186606	POU5F1_SOX2{dimer}.p2	AK149022|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr10_+_61155793_61155924	0.0184144	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr4_-_34754469_34754554	0.018091	POU5F1_SOX2{dimer}.p2	AB221605|Zfp292|30046|zinc finger protein 292
mm9_v1_chr3_+_60276971_60277044	0.0180011	POU5F1_SOX2{dimer}.p2	AK153827|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr12_+_66018897_66018897	0.0179626	POU5F1_SOX2{dimer}.p2	BC099503|Gm527|217648|predicted gene 527	NM_001025605|Gm527|217648|predicted gene 527
mm9_v1_chr10_-_80507150_80507447	0.0177843	POU5F1_SOX2{dimer}.p2	AK208305|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK215998|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK191756|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK212065|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	AK196000|Sgta|52551|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
mm9_v1_chr5_-_28564412_28564412	0.017781	POU5F1_SOX2{dimer}.p2	AK035828|Cnpy1|269637|canopy 1 homolog (zebrafish)	NM_175651|Cnpy1|269637|canopy 1 homolog (zebrafish)
mm9_v1_chr2_-_38080023_38080025	0.0165515	POU5F1_SOX2{dimer}.p2	AK033323|8030493G06Rik|320880|RIKEN cDNA 8030493G06 gene
mm9_v1_chr18_-_36926866_36926900	0.0164505	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr13_+_55802874_55802961	0.0159481	POU5F1_SOX2{dimer}.p2	BC006718|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr3_+_95238342_95238357	0.0151179	POU5F1_SOX2{dimer}.p2	BC012870|Arnt|11863|aryl hydrocarbon receptor nuclear translocator	AK145415|Arnt|11863|aryl hydrocarbon receptor nuclear translocator
mm9_v1_chr8_+_125925000_125925050	0.014486	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr2_+_32087125_32087136	0.0142721	POU5F1_SOX2{dimer}.p2	AK161103|Prrc2b|227723|proline-rich coiled-coil 2B
mm9_v1_chr2_-_94252368_94252477	0.0142416	POU5F1_SOX2{dimer}.p2	AK212083|Api5|11800|apoptosis inhibitor 5
mm9_v1_chr3_+_157204031_157204041	0.0142013	POU5F1_SOX2{dimer}.p2	BC051187|Zranb2|53861|zinc finger, RAN-binding domain containing 2
mm9_v1_chr6_+_48995303_48995460	0.0141374	POU5F1_SOX2{dimer}.p2	AK179971|Gpnmb|93695|glycoprotein (transmembrane) nmb
mm9_v1_chr12_-_32017267_32017279	0.0140372	POU5F1_SOX2{dimer}.p2	AK209175|Dld|13382|dihydrolipoamide dehydrogenase
mm9_v1_chr11_+_95343299_95343327	0.0140071	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr1_+_109407998_109408121	0.0133282	POU5F1_SOX2{dimer}.p2	AK081487|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_001174170|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_011111|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	AK090049|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm9_v1_chr5_+_8422837_8422987	0.013065	POU5F1_SOX2{dimer}.p2	AK044260|Slc25a40|319653|solute carrier family 25, member 40	AK045863|Slc25a40|319653|solute carrier family 25, member 40	NM_178766|Slc25a40|319653|solute carrier family 25, member 40	AK044862|Slc25a40|319653|solute carrier family 25, member 40	AK136770|Slc25a40|319653|solute carrier family 25, member 40	AK163037|Slc25a40|319653|solute carrier family 25, member 40	AK088444|Slc25a40|319653|solute carrier family 25, member 40	AK079538|Slc25a40|319653|solute carrier family 25, member 40	AK084797|Slc25a40|319653|solute carrier family 25, member 40	BC083103|Slc25a40|319653|solute carrier family 25, member 40
mm9_v1_chrX_-_45944937_45944938	0.0119835	POU5F1_SOX2{dimer}.p2	BC051397|Zfp280c|208968|zinc finger protein 280C	NM_001166650|Zfp280c|208968|zinc finger protein 280C	BC028839|Zfp280c|208968|zinc finger protein 280C
mm9_v1_chr2_-_87475901_87475901	0.0117538	POU5F1_SOX2{dimer}.p2	NM_146836|Olfr1132|258833|olfactory receptor 1132
mm9_v1_chr13_-_67500685_67500702	0.0114044	POU5F1_SOX2{dimer}.p2	AK083314|Zfp429|72807|zinc finger protein 429	BC046484|Zfp429|72807|zinc finger protein 429	NM_001080941|Zfp429|72807|zinc finger protein 429
mm9_v1_chr9_-_36540210_36540345	0.0108701	POU5F1_SOX2{dimer}.p2	AK017358|Stt3a|16430|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm9_v1_chr5_+_135526788_135526925	0.0105875	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr11_-_51419012_51419040	0.0104259	POU5F1_SOX2{dimer}.p2	AK207379|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr4_-_9596206_9596308	0.010189	POU5F1_SOX2{dimer}.p2	BC015281|Asph|65973|aspartate-beta-hydroxylase	AF289486|Asph|65973|aspartate-beta-hydroxylase	AF289487|Asph|65973|aspartate-beta-hydroxylase	AF289488|Asph|65973|aspartate-beta-hydroxylase	AK030293|Asph|65973|aspartate-beta-hydroxylase	AK032420|Asph|65973|aspartate-beta-hydroxylase	AK151787|Asph|65973|aspartate-beta-hydroxylase	AK049506|Asph|65973|aspartate-beta-hydroxylase	AK139566|Asph|65973|aspartate-beta-hydroxylase	AK160984|Asph|65973|aspartate-beta-hydroxylase	AK165260|Asph|65973|aspartate-beta-hydroxylase	BC061098|Asph|65973|aspartate-beta-hydroxylase	NM_001177849|Asph|65973|aspartate-beta-hydroxylase	NM_001177850|Asph|65973|aspartate-beta-hydroxylase	NM_001177851|Asph|65973|aspartate-beta-hydroxylase	NM_001177855|Asph|65973|aspartate-beta-hydroxylase	NM_001177856|Asph|65973|aspartate-beta-hydroxylase	NM_023066|Asph|65973|aspartate-beta-hydroxylase
mm9_v1_chr17_-_24211852_24211965	0.0101683	POU5F1_SOX2{dimer}.p2	AK079579|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1
mm9_v1_chr18_-_46901117_46901234	0.00998927	POU5F1_SOX2{dimer}.p2	BC070470|Atg12|67526|autophagy-related 12 (yeast)	AB066216|Atg12|67526|autophagy-related 12 (yeast)	AK167027|Atg12|67526|autophagy-related 12 (yeast)	AK008698|Atg12|67526|autophagy-related 12 (yeast)	AK016474|Atg12|67526|autophagy-related 12 (yeast)	AK039278|Atg12|67526|autophagy-related 12 (yeast)	AK039546|Atg12|67526|autophagy-related 12 (yeast)	AK005405|Atg12|67526|autophagy-related 12 (yeast)	NM_026217|Atg12|67526|autophagy-related 12 (yeast)
mm9_v1_chr19_-_46119403_46119446	0.00993461	POU5F1_SOX2{dimer}.p2	AF030333|Ldb1|16825|LIM domain binding 1
mm9_v1_chr6_+_33922645_33922791	0.00900786	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr3_-_151856716_151856729	0.00716518	POU5F1_SOX2{dimer}.p2	AK028049|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK008537|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK162194|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK136240|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr3_-_148617598_148617598	0.0068679	POU5F1_SOX2{dimer}.p2	NM_001081298|Lphn2|99633|latrophilin 2
mm9_v1_chr3_+_137940628_137940681	0.00672407	POU5F1_SOX2{dimer}.p2	BC054467|Adh1|11522|alcohol dehydrogenase 1 (class I)
mm9_v1_chr14_-_51766415_51766443	0.00662033	POU5F1_SOX2{dimer}.p2	M27814|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)	BC030036|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)	AK075775|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)	NM_011271|Rnase1|19752|ribonuclease, RNase A family, 1 (pancreatic)
mm9_v1_chr17_-_30729995_30730086	0.0064375	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr7_+_24897332_24897378	0.00617991	POU5F1_SOX2{dimer}.p2	AF167319|Zfp112|57745|zinc finger protein 112	NM_021307|Zfp112|57745|zinc finger protein 112	BC120886|Zfp112|57745|zinc finger protein 112
mm9_v1_chr18_+_37866747_37866882	0.00596732	POU5F1_SOX2{dimer}.p2	BC059927|Pcdhga6|93714|protocadherin gamma subfamily A, 6	BC080852|Pcdhga6|93714|protocadherin gamma subfamily A, 6	AY013800|Pcdhga6|93714|protocadherin gamma subfamily A, 6	NM_033589|Pcdhga6|93714|protocadherin gamma subfamily A, 6
mm9_v1_chr13_+_4058817_4058874	0.00591576	POU5F1_SOX2{dimer}.p2	AK086887|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK033537|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK136528|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC013482|Akr1c14|105387|aldo-keto reductase family 1, member C14	NM_134072|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC026628|Akr1c14|105387|aldo-keto reductase family 1, member C14	AY730283|Akr1c14|105387|aldo-keto reductase family 1, member C14
mm9_v1_chrX_-_100958883_100958891	0.00547371	POU5F1_SOX2{dimer}.p2	BC158129|Gm6222|621381|predicted pseudogene 6222	NM_001170979|Gm6222|621381|predicted pseudogene 6222
mm9_v1_chr19_-_44471675_44471892	0.00480082	POU5F1_SOX2{dimer}.p2	AK012370|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr18_+_37849488_37849707	0.00479328	POU5F1_SOX2{dimer}.p2	BC054557|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	NM_033575|Pcdhgb2|93700|protocadherin gamma subfamily B, 2	AY013805|Pcdhgb2|93700|protocadherin gamma subfamily B, 2
mm9_v1_chr10_+_23680299_23680380	0.00390428	POU5F1_SOX2{dimer}.p2	NM_001008499|Taar4|209513|trace amine-associated receptor 4	BC117729|Taar4|209513|trace amine-associated receptor 4	BC117730|Taar4|209513|trace amine-associated receptor 4	AY255547|Taar4|209513|trace amine-associated receptor 4
mm9_v1_chr2_+_38441497_38441644	0.00371926	POU5F1_SOX2{dimer}.p2	AK214670|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK208733|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6
mm9_v1_chr6_+_122871804_122871930	0.00318476	POU5F1_SOX2{dimer}.p2	BC049354|Clec4a1|269799|C-type lectin domain family 4, member a1	NM_199311|Clec4a1|269799|C-type lectin domain family 4, member a1	AY397675|Clec4a1|269799|C-type lectin domain family 4, member a1
mm9_v1_chr2_-_87990239_87990239	0.00312312	POU5F1_SOX2{dimer}.p2	BC119292|Olfr1167|258291|olfactory receptor 1167	BC137817|Olfr1167|258291|olfactory receptor 1167	NM_146294|Olfr1167|258291|olfactory receptor 1167
mm9_v1_chr8_+_131237118_131237130	0.00297093	POU5F1_SOX2{dimer}.p2	AK076526|Itgb1|16412|integrin beta 1 (fibronectin receptor beta)
mm9_v1_chr1_+_172949069_172949110	0.00287719	POU5F1_SOX2{dimer}.p2	BC027310|Fcgr4|246256|Fc receptor, IgG, low affinity IV	AK170920|Fcgr4|246256|Fc receptor, IgG, low affinity IV	AF499613|Fcgr4|246256|Fc receptor, IgG, low affinity IV	EU050648|Fcgr4|246256|Fc receptor, IgG, low affinity IV
mm9_v1_chr18_+_65352751_65352821	0.00250545	POU5F1_SOX2{dimer}.p2	AK213593|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like	AK215536|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr8_-_22995888_22995905	0.00238464	POU5F1_SOX2{dimer}.p2	BC109177|Defb9|246079|defensin beta 9	AJ437647|Defb9|246079|defensin beta 9	NM_139219|Defb9|246079|defensin beta 9
mm9_v1_chr3_-_38349112_38349206	0.00218371	POU5F1_SOX2{dimer}.p2	BC051515|Ankrd50|99696|ankyrin repeat domain 50
mm9_v1_chr9_-_114549148_114549229	0.00160509	POU5F1_SOX2{dimer}.p2	AK149944|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK167288|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	BC025554|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK029103|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	NM_153585|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK080503|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK157824|Cnot10|78893|CCR4-NOT transcription complex, subunit 10
mm9_v1_chr4_+_39397325_39397476	0.00154741	POU5F1_SOX2{dimer}.p2	NM_001081095|1700009N14Rik|75471|RIKEN cDNA 1700009N14 gene	AK005799|1700009N14Rik|75471|RIKEN cDNA 1700009N14 gene	BC116915|1700009N14Rik|75471|RIKEN cDNA 1700009N14 gene	BC116917|1700009N14Rik|75471|RIKEN cDNA 1700009N14 gene
mm9_v1_chr16_+_49868005_49868080	0.0012425	POU5F1_SOX2{dimer}.p2	BC009094|Cd47|16423|CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
mm9_v1_chr9_-_114549261_114549332	0.00112291	POU5F1_SOX2{dimer}.p2	BC036179|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	BC039183|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK171701|Cnot10|78893|CCR4-NOT transcription complex, subunit 10	AK161842|Cnot10|78893|CCR4-NOT transcription complex, subunit 10
mm9_v1_chr9_+_39421128_39421153	0.000942829	POU5F1_SOX2{dimer}.p2	BC125353|Olfr148|258498|olfactory receptor 148	BC132239|Olfr148|258498|olfactory receptor 148	NM_146505|Olfr148|258498|olfactory receptor 148
mm9_v1_chr13_+_78164162_78164172	0.000802349	POU5F1_SOX2{dimer}.p2	AK005948|Pou5f2|75507|POU domain class 5, transcription factor 2	NM_029315|Pou5f2|75507|POU domain class 5, transcription factor 2	AK076753|Pou5f2|75507|POU domain class 5, transcription factor 2
mm9_v1_chr1_-_75178465_75178492	0.000707571	POU5F1_SOX2{dimer}.p2	
mm9_v1_chr7_+_25247448_25247518	0.000401764	POU5F1_SOX2{dimer}.p2	AK002580|Plaur|18793|plasminogen activator, urokinase receptor	AK144796|Plaur|18793|plasminogen activator, urokinase receptor	AK154141|Plaur|18793|plasminogen activator, urokinase receptor	AK131951|Plaur|18793|plasminogen activator, urokinase receptor	AK146827|Plaur|18793|plasminogen activator, urokinase receptor	AK155351|Plaur|18793|plasminogen activator, urokinase receptor	BC010309|Plaur|18793|plasminogen activator, urokinase receptor	NM_011113|Plaur|18793|plasminogen activator, urokinase receptor	X62700|Plaur|18793|plasminogen activator, urokinase receptor	X62701|Plaur|18793|plasminogen activator, urokinase receptor
mm9_v1_chr7_+_110477001_110477001	0.000227596	POU5F1_SOX2{dimer}.p2	NM_001011793|Olfr598|257975|olfactory receptor 598
